Merge pull request #1114 from coleam00/dev

Release 0.3.6

Author: Wirasm

.claude/rules/cli.md

@@ -29,9 +29,10 @@ bun run cli version
 
 ## Startup Behavior
 
-1. Loads `~/.archon/.env` with `override: true` (Archon's config wins over any Bun-auto-loaded CWD vars)
-2. Smart Claude auth default: if no `CLAUDE_API_KEY` or `CLAUDE_CODE_OAUTH_TOKEN`, sets `CLAUDE_USE_GLOBAL_AUTH=true`
-3. Imports all commands AFTER dotenv setup
+1. `@archon/paths/strip-cwd-env-boot` (first import) removes all Bun-auto-loaded CWD `.env` keys from `process.env`
+2. Loads `~/.archon/.env` with `override: true` (Archon config wins over shell-inherited vars)
+3. Smart Claude auth default: if no `CLAUDE_API_KEY` or `CLAUDE_CODE_OAUTH_TOKEN`, sets `CLAUDE_USE_GLOBAL_AUTH=true`
+4. Imports all commands AFTER dotenv setup
 
 ## WorkflowRunOptions Interface
 

CHANGELOG.md

@@ -7,6 +7,30 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [0.3.6] - 2026-04-12
+
+Web UI workflow experience improvements, CWD environment leak protection, and bug fixes.
+
+### Added
+
+- Workflow result card now shows status, duration, node count, and artifact links in chat (#1015)
+- Loop iteration progress display in the workflow execution view (#1014)
+- Artifact file paths in chat messages are now clickable (#1023)
+
+### Changed
+
+- CWD `.env` variables are now stripped from AI subprocess environments at the `@archon/paths` layer, replacing the old `SUBPROCESS_ENV_ALLOWLIST` approach. Prevents accidental credential leaks from target repo `.env` files (#1067, #1030, #1098, #1070)
+- Update check cache TTL reduced from 24 hours to 1 hour
+
+### Fixed
+
+- Duplicate text and tool calls appearing in workflow execution view
+- `workflow_step` SSE events not handled correctly, causing missing progress updates
+- Nested interactive elements in workflow UI causing React warnings
+- Workflow status messages not splitting correctly in WorkflowLogs
+- Incorrect `remainingMessage` suppression in stream mode causing lost output
+- Binary builds now use `BUNDLED_VERSION` for the app version instead of reading `package.json`
+
 ## [0.3.5] - 2026-04-10
 
 Fixes for `archon serve` process lifecycle and static file serving.

CLAUDE.md

@@ -399,7 +399,7 @@ import type { DagNode, WorkflowDefinition } from '@/lib/api';
 ### Architecture Layers
 
 **Package Split:**
-- **@archon/paths**: Path resolution utilities, Pino logger factory, web dist cache path (`getWebDistDir`) (no @archon/* deps)
+- **@archon/paths**: Path resolution utilities, Pino logger factory, web dist cache path (`getWebDistDir`), CWD env stripper (`stripCwdEnv`, `strip-cwd-env-boot`) (no @archon/* deps; `pino` and `dotenv` are allowed external deps)
 - **@archon/git**: Git operations - worktrees, branches, repos, exec wrappers (depends only on @archon/paths)
 - **@archon/isolation**: Worktree isolation types, providers, resolver, error classifiers (depends only on @archon/git + @archon/paths)
 - **@archon/workflows**: Workflow engine - loader, router, executor, DAG, logger, bundled defaults (depends only on @archon/git + @archon/paths + @hono/zod-openapi + zod; DB/AI/config injected via `WorkflowDeps`)

bun.lock

@@ -1,6 +1,6 @@
 {
   "name": "archon",
-  "version": "0.3.5",
+  "version": "0.3.6",
   "private": true,
   "workspaces": [
     "packages/*"

package.json

@@ -1,6 +1,6 @@
 {
   "name": "@archon/adapters",
-  "version": "0.3.5",
+  "version": "0.3.6",
   "type": "module",
   "main": "./src/index.ts",
   "types": "./src/index.ts",

packages/adapters/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@archon/cli",
-  "version": "0.3.5",
+  "version": "0.3.6",
   "type": "module",
   "main": "./src/cli.ts",
   "bin": {

packages/cli/package.json

@@ -7,18 +7,18 @@
  *   archon workflow run <name> [msg]  Run a workflow
  *   archon version                    Show version info
  */
+// Must be the very first import — strips Bun-auto-loaded CWD .env keys before
+// any module reads process.env at init time (e.g. @archon/paths/logger reads LOG_LEVEL).
+import '@archon/paths/strip-cwd-env-boot';
 import { parseArgs } from 'util';
 import { config } from 'dotenv';
 import { resolve } from 'path';
 import { existsSync } from 'fs';
 
-// Load .env from global Archon config (override: true so ~/.archon/.env
-// always wins over any Bun-auto-loaded CWD vars).
-//
-// Credential safety: target repo .env keys that Bun auto-loads from CWD
-// cannot leak into AI subprocesses — SUBPROCESS_ENV_ALLOWLIST blocks them.
-// The env-leak gate provides a second layer by scanning target repos before
-// spawning. No CWD stripping needed.
+// Load ~/.archon/.env with override: true — Archon-specific config must win
+// over shell-inherited env vars (e.g. PORT, LOG_LEVEL from shell profile).
+// CWD .env keys are already gone (stripCwdEnv above), so override only
+// affects shell-inherited values, which is the intended behavior.
 const globalEnvPath = resolve(process.env.HOME ?? '~', '.archon', '.env');
 if (existsSync(globalEnvPath)) {
   const result = config({ path: globalEnvPath, override: true });
@@ -30,6 +30,9 @@ if (existsSync(globalEnvPath)) {
   }
 }
 
+// CLAUDECODE=1 warning is emitted inside stripCwdEnv() (boot import above)
+// BEFORE the marker is deleted from process.env. No duplicate warning here.
+
 // Smart defaults for Claude auth
 // If no explicit tokens, default to global auth from `claude /login`
 if (!process.env.CLAUDE_API_KEY && !process.env.CLAUDE_CODE_OAUTH_TOKEN) {

packages/cli/src/cli.ts

@@ -60,7 +60,6 @@ export async function serveCommand(opts: ServeOptions): Promise<number> {
     await startServer({
       webDistPath: webDistDir,
       port: opts.port,
-      skipPlatformAdapters: true,
     });
   } catch (err) {
     const error = toError(err);

packages/cli/src/commands/serve.ts

@@ -1,6 +1,6 @@
 {
   "name": "@archon/core",
-  "version": "0.3.5",
+  "version": "0.3.6",
   "type": "module",
   "main": "./src/index.ts",
   "types": "./src/index.ts",
@@ -23,7 +23,7 @@
     "./state/*": "./src/state/*.ts"
   },
   "scripts": {
-    "test": "bun test src/clients/codex-binary-guard.test.ts && bun test src/utils/codex-binary-resolver.test.ts && bun test src/utils/codex-binary-resolver-dev.test.ts && bun test src/clients/claude.test.ts src/clients/codex.test.ts src/clients/factory.test.ts && bun test src/handlers/command-handler.test.ts && bun test src/handlers/clone.test.ts && bun test src/db/adapters/postgres.test.ts && bun test src/db/adapters/sqlite.test.ts src/db/codebases.test.ts src/db/connection.test.ts src/db/conversations.test.ts src/db/env-vars.test.ts src/db/isolation-environments.test.ts src/db/messages.test.ts src/db/sessions.test.ts src/db/workflow-events.test.ts src/db/workflows.test.ts src/utils/defaults-copy.test.ts src/utils/worktree-sync.test.ts src/utils/conversation-lock.test.ts src/utils/credential-sanitizer.test.ts src/utils/port-allocation.test.ts src/utils/error.test.ts src/utils/error-formatter.test.ts src/utils/github-graphql.test.ts src/utils/env-allowlist.test.ts src/utils/env-leak-scanner.test.ts src/config/ src/state/ && bun test src/utils/path-validation.test.ts && bun test src/services/cleanup-service.test.ts && bun test src/services/title-generator.test.ts && bun test src/workflows/ && bun test src/operations/workflow-operations.test.ts && bun test src/operations/isolation-operations.test.ts && bun test src/orchestrator/orchestrator.test.ts && bun test src/orchestrator/orchestrator-agent.test.ts && bun test src/orchestrator/orchestrator-isolation.test.ts",
+    "test": "bun test src/clients/codex-binary-guard.test.ts && bun test src/utils/codex-binary-resolver.test.ts && bun test src/utils/codex-binary-resolver-dev.test.ts && bun test src/clients/claude.test.ts src/clients/codex.test.ts src/clients/factory.test.ts && bun test src/handlers/command-handler.test.ts && bun test src/handlers/clone.test.ts && bun test src/db/adapters/postgres.test.ts && bun test src/db/adapters/sqlite.test.ts src/db/codebases.test.ts src/db/connection.test.ts src/db/conversations.test.ts src/db/env-vars.test.ts src/db/isolation-environments.test.ts src/db/messages.test.ts src/db/sessions.test.ts src/db/workflow-events.test.ts src/db/workflows.test.ts src/utils/defaults-copy.test.ts src/utils/worktree-sync.test.ts src/utils/conversation-lock.test.ts src/utils/credential-sanitizer.test.ts src/utils/port-allocation.test.ts src/utils/error.test.ts src/utils/error-formatter.test.ts src/utils/github-graphql.test.ts src/utils/env-leak-scanner.test.ts src/config/ src/state/ && bun test src/utils/path-validation.test.ts && bun test src/services/cleanup-service.test.ts && bun test src/services/title-generator.test.ts && bun test src/workflows/ && bun test src/operations/workflow-operations.test.ts && bun test src/operations/isolation-operations.test.ts && bun test src/orchestrator/orchestrator.test.ts && bun test src/orchestrator/orchestrator-agent.test.ts && bun test src/orchestrator/orchestrator-isolation.test.ts",
     "type-check": "bun x tsc --noEmit",
     "build": "echo 'No build needed - Bun runs TypeScript directly'"
   },