downgrade to prov 1.5.1

Author: mr-c

cwlprov/prov.py

@@ -55,12 +55,13 @@
     ProvSpecialization,
     ProvStart,
     ProvUsage,
-    QualifiedNameCandidate,
 )
 
 from .utils import first, prov_type
 
 if TYPE_CHECKING:
+    from prov.model import QualifiedNameCandidate
+
     from .ro import ResearchObject
 
 CWLPROV = Namespace("cwlprov", "https://w3id.org/cwl/prov#")
@@ -225,10 +226,10 @@ def __repr__(self) -> str:
     def __str__(self) -> str:
         return self.record.get_provn()
 
-    def _prov_attr(self, attr: QualifiedNameCandidate) -> Optional[QualifiedName]:
+    def _prov_attr(self, attr: "QualifiedNameCandidate") -> Optional[QualifiedName]:
         return first(self._prov_attrs(attr))
 
-    def _prov_attrs(self, attr: QualifiedNameCandidate) -> set[QualifiedName]:
+    def _prov_attrs(self, attr: "QualifiedNameCandidate") -> set[QualifiedName]:
         return self.record.get_attribute(attr)
 
 

mypy-stubs/prov/__init__.pyi

@@ -1,13 +1,8 @@
-import os
-from prov.model import ProvDocument
-
-__all__ = ["Error", "model", "read"]
+from _typeshed import Incomplete
 
 class Error(Exception): ...
 
-def read(
-    source: str | bytes | os.PathLike[str], format: str | None = None
-) -> ProvDocument | None: ...
+# def read(source, format: Incomplete | None = ...): ...
 
 # Names in __all__ with no definition:
 #   model

mypy-stubs/prov/constants.pyi

@@ -1,54 +1,41 @@
-import pydot
 from _typeshed import Incomplete
-from prov.graph import INFERRED_ELEMENT_CLASS as INFERRED_ELEMENT_CLASS
-from prov.identifier import QualifiedName as QualifiedName
-from prov.model import (
-    Identifier as Identifier,
-    PROV_ACTIVITY as PROV_ACTIVITY,
-    PROV_AGENT as PROV_AGENT,
-    PROV_ALTERNATE as PROV_ALTERNATE,
-    PROV_ASSOCIATION as PROV_ASSOCIATION,
-    PROV_ATTRIBUTE_QNAMES as PROV_ATTRIBUTE_QNAMES,
-    PROV_ATTRIBUTION as PROV_ATTRIBUTION,
-    PROV_BUNDLE as PROV_BUNDLE,
-    PROV_COMMUNICATION as PROV_COMMUNICATION,
-    PROV_DELEGATION as PROV_DELEGATION,
-    PROV_DERIVATION as PROV_DERIVATION,
-    PROV_END as PROV_END,
-    PROV_ENTITY as PROV_ENTITY,
-    PROV_GENERATION as PROV_GENERATION,
-    PROV_INFLUENCE as PROV_INFLUENCE,
-    PROV_INVALIDATION as PROV_INVALIDATION,
-    PROV_MEMBERSHIP as PROV_MEMBERSHIP,
-    PROV_MENTION as PROV_MENTION,
-    PROV_SPECIALIZATION as PROV_SPECIALIZATION,
-    PROV_START as PROV_START,
-    PROV_USAGE as PROV_USAGE,
-    ProvActivity as ProvActivity,
-    ProvAgent as ProvAgent,
-    ProvBundle as ProvBundle,
-    ProvElement as ProvElement,
-    ProvEntity as ProvEntity,
-    ProvException as ProvException,
-    ProvRecord as ProvRecord,
-    sorted_attributes as sorted_attributes,
-)
-from typing import Any
+from prov.model import PROV_ACTIVITY as PROV_ACTIVITY
+from prov.model import PROV_AGENT as PROV_AGENT
+from prov.model import PROV_ALTERNATE as PROV_ALTERNATE
+from prov.model import PROV_ASSOCIATION as PROV_ASSOCIATION
+from prov.model import PROV_ATTRIBUTE_QNAMES as PROV_ATTRIBUTE_QNAMES
+from prov.model import PROV_ATTRIBUTION as PROV_ATTRIBUTION
+from prov.model import PROV_BUNDLE as PROV_BUNDLE
+from prov.model import PROV_COMMUNICATION as PROV_COMMUNICATION
+from prov.model import PROV_DELEGATION as PROV_DELEGATION
+from prov.model import PROV_DERIVATION as PROV_DERIVATION
+from prov.model import PROV_END as PROV_END
+from prov.model import PROV_ENTITY as PROV_ENTITY
+from prov.model import PROV_GENERATION as PROV_GENERATION
+from prov.model import PROV_INFLUENCE as PROV_INFLUENCE
+from prov.model import PROV_INVALIDATION as PROV_INVALIDATION
+from prov.model import PROV_MEMBERSHIP as PROV_MEMBERSHIP
+from prov.model import PROV_MENTION as PROV_MENTION
+from prov.model import PROV_SPECIALIZATION as PROV_SPECIALIZATION
+from prov.model import PROV_START as PROV_START
+from prov.model import PROV_USAGE as PROV_USAGE
+from prov.model import Identifier as Identifier
+from prov.model import ProvException as ProvException
+from prov.model import sorted_attributes as sorted_attributes
 
-GENERIC_NODE_STYLE: dict[type[ProvElement | ProvBundle] | None, dict[str, str]]
 DOT_PROV_STYLE: Incomplete
 ANNOTATION_STYLE: Incomplete
 ANNOTATION_LINK_STYLE: Incomplete
 ANNOTATION_START_ROW: str
 ANNOTATION_ROW_TEMPLATE: str
 ANNOTATION_END_ROW: str
 
-def htlm_link_if_uri(value: Any) -> str: ...
+def htlm_link_if_uri(value): ...
 def prov_to_dot(
-    bundle: ProvBundle,
-    show_nary: bool = True,
-    use_labels: bool = False,
-    direction: str = "BT",
-    show_element_attributes: bool = True,
-    show_relation_attributes: bool = True,
-) -> pydot.Dot: ...
+    bundle,
+    show_nary: bool = ...,
+    use_labels: bool = ...,
+    direction: str = ...,
+    show_element_attributes: bool = ...,
+    show_relation_attributes: bool = ...,
+): ...

mypy-stubs/prov/dot.pyi

@@ -1,36 +1,28 @@
-import networkx as nx
 from _typeshed import Incomplete
-from prov.model import (
-    PROV_ATTR_ACTIVITY as PROV_ATTR_ACTIVITY,
-    PROV_ATTR_AGENT as PROV_ATTR_AGENT,
-    PROV_ATTR_ALTERNATE1 as PROV_ATTR_ALTERNATE1,
-    PROV_ATTR_ALTERNATE2 as PROV_ATTR_ALTERNATE2,
-    PROV_ATTR_BUNDLE as PROV_ATTR_BUNDLE,
-    PROV_ATTR_COLLECTION as PROV_ATTR_COLLECTION,
-    PROV_ATTR_DELEGATE as PROV_ATTR_DELEGATE,
-    PROV_ATTR_ENDER as PROV_ATTR_ENDER,
-    PROV_ATTR_ENTITY as PROV_ATTR_ENTITY,
-    PROV_ATTR_GENERAL_ENTITY as PROV_ATTR_GENERAL_ENTITY,
-    PROV_ATTR_GENERATED_ENTITY as PROV_ATTR_GENERATED_ENTITY,
-    PROV_ATTR_INFORMANT as PROV_ATTR_INFORMANT,
-    PROV_ATTR_INFORMED as PROV_ATTR_INFORMED,
-    PROV_ATTR_PLAN as PROV_ATTR_PLAN,
-    PROV_ATTR_RESPONSIBLE as PROV_ATTR_RESPONSIBLE,
-    PROV_ATTR_SPECIFIC_ENTITY as PROV_ATTR_SPECIFIC_ENTITY,
-    PROV_ATTR_STARTER as PROV_ATTR_STARTER,
-    PROV_ATTR_TRIGGER as PROV_ATTR_TRIGGER,
-    PROV_ATTR_USED_ENTITY as PROV_ATTR_USED_ENTITY,
-    ProvActivity as ProvActivity,
-    ProvAgent as ProvAgent,
-    ProvBundle as ProvBundle,
-    ProvDocument as ProvDocument,
-    ProvElement as ProvElement,
-    ProvEntity as ProvEntity,
-    ProvRecord as ProvRecord,
-    ProvRelation as ProvRelation,
-)
+from prov.model import PROV_ATTR_ACTIVITY as PROV_ATTR_ACTIVITY
+from prov.model import PROV_ATTR_AGENT as PROV_ATTR_AGENT
+from prov.model import PROV_ATTR_ALTERNATE1 as PROV_ATTR_ALTERNATE1
+from prov.model import PROV_ATTR_ALTERNATE2 as PROV_ATTR_ALTERNATE2
+from prov.model import PROV_ATTR_COLLECTION as PROV_ATTR_COLLECTION
+from prov.model import PROV_ATTR_DELEGATE as PROV_ATTR_DELEGATE
+from prov.model import PROV_ATTR_ENTITY as PROV_ATTR_ENTITY
+from prov.model import PROV_ATTR_GENERAL_ENTITY as PROV_ATTR_GENERAL_ENTITY
+from prov.model import PROV_ATTR_GENERATED_ENTITY as PROV_ATTR_GENERATED_ENTITY
+from prov.model import PROV_ATTR_INFORMANT as PROV_ATTR_INFORMANT
+from prov.model import PROV_ATTR_INFORMED as PROV_ATTR_INFORMED
+from prov.model import PROV_ATTR_RESPONSIBLE as PROV_ATTR_RESPONSIBLE
+from prov.model import PROV_ATTR_SPECIFIC_ENTITY as PROV_ATTR_SPECIFIC_ENTITY
+from prov.model import PROV_ATTR_TRIGGER as PROV_ATTR_TRIGGER
+from prov.model import PROV_ATTR_USED_ENTITY as PROV_ATTR_USED_ENTITY
+from prov.model import ProvActivity as ProvActivity
+from prov.model import ProvAgent as ProvAgent
+from prov.model import ProvDocument as ProvDocument
+from prov.model import ProvElement as ProvElement
+from prov.model import ProvEntity as ProvEntity
+from prov.model import ProvRecord as ProvRecord
+from prov.model import ProvRelation as ProvRelation
 
 INFERRED_ELEMENT_CLASS: Incomplete
 
-def prov_to_graph(prov_document: ProvDocument) -> nx.MultiDiGraph: ...
-def graph_to_prov(g: nx.MultiDiGraph) -> ProvDocument: ...
+def prov_to_graph(prov_document): ...
+def graph_to_prov(g): ...

mypy-stubs/prov/graph.pyi

@@ -1,4 +1,4 @@
-from typing import Any
+from typing import Any, Union
 
 class Identifier:
     def __init__(self, uri: str) -> None: ...
@@ -9,9 +9,9 @@ class Identifier:
     def provn_representation(self) -> str: ...
 
 class QualifiedName(Identifier):
-    def __init__(self, namespace: Namespace, localpart: str) -> None: ...
+    def __init__(self, namespace: str, localpart: str) -> None: ...
     @property
-    def namespace(self) -> Namespace: ...
+    def namespace(self) -> str: ...
     @property
     def localpart(self) -> str: ...
     def __hash__(self) -> int: ...
@@ -23,8 +23,8 @@ class Namespace:
     def uri(self) -> str: ...
     @property
     def prefix(self) -> str: ...
-    def contains(self, identifier: Identifier) -> bool: ...
-    def qname(self, identifier: str | Identifier) -> QualifiedName | None: ...
+    def contains(self, identifier: Identifier | str) -> bool: ...
+    def qname(self, identifier: Identifier | str) -> QualifiedName: ...
     def __eq__(self, other: Any) -> bool: ...
     def __ne__(self, other: Any) -> bool: ...
     def __hash__(self) -> int: ...