Merge pull request #29706 from carterbox/libsbml-plus-packages

add libsml-plus-packages for libSBML C++ library

Author: carterbox

recipes/libsbml/bld.bat

@@ -0,0 +1,21 @@
+echo on
+
+xcopy LICENSE.txt %PREFIX%\
+
+cmake -G"Ninja" -S . -B build ^
+    %CMAKE_ARGS% ^
+    -DCMAKE_BUILD_TYPE=Release ^
+    -DBUILD_SHARED_LIBS=ON ^
+    -DCMAKE_CXX_STANDARD_LIBRARIES=-lxml2 ^
+    -DLIBXML_LIBRARY="%PREFIX%"/Library/lib/libxml2.lib ^
+    -DLIBXML_INCLUDE_DIR="%PREFIX%"/Library/include/libxml2 ^
+    -DWITH_SWIG=OFF ^
+    -DWITH_STABLE_PACKAGES=ON ^
+    -DWITH_CPP_NAMESPACE=ON
+
+cmake --build build --parallel %CPU_COUNT% --config Release
+cmake --build build --target install
+
+del /q %PREFIX%\Library\share\cmake\Modules\FindLIBXML.cmake
+del /q %PREFIX%\Library\share\cmake\Modules\FindBZ2.cmake
+del /q %PREFIX%\Library\share\cmake\Modules\FindZLIB.cmake

recipes/libsbml/build.sh

@@ -0,0 +1,31 @@
+#!/bin/bash
+
+cp LICENSE.txt ${PREFIX}
+
+mkdir build
+cd build
+
+declare -a CMAKE_LIBXML_LIBRARY
+if [[ ${target_platform} == osx-*64 ]]; then
+  CMAKE_LIBXML_LIBRARY+=(-DLIBXML_LIBRARY="${PREFIX}"/lib/libxml2.dylib)
+elif [[ ${target_platform} == linux-*64 ]]; then
+  CMAKE_LIBXML_LIBRARY+=(-DLIBXML_LIBRARY="${PREFIX}"/lib/libxml2.so)
+fi
+
+cmake ${CMAKE_ARGS} \
+      -DCMAKE_BUILD_TYPE=Release \
+      -DBUILD_SHARED_LIBS=ON \
+      -DCMAKE_CXX_STANDARD_LIBRARIES=-lxml2 \
+      "${CMAKE_LIBXML_LIBRARY[@]}" \
+      -DLIBXML_INCLUDE_DIR=${PREFIX}/include/libxml2 \
+      -DWITH_SWIG=OFF \
+      -DWITH_STABLE_PACKAGES=ON \
+      -DWITH_CPP_NAMESPACE=ON \
+      ..
+
+make -j"${CPU_COUNT}"
+make install
+
+rm ${PREFIX}/share/cmake/Modules/FindLIBXML.cmake
+rm ${PREFIX}/share/cmake/Modules/FindBZ2.cmake
+rm ${PREFIX}/share/cmake/Modules/FindZLIB.cmake

recipes/libsbml/conda_build_config.yaml

@@ -0,0 +1,8 @@
+libxml2:
+  - 2.9  # [linux]
+  - 2.10  # [linux]
+  - 2.11  # [linux]
+  - 2.12
+  - 2.13
+pin_run_as_build:
+  libxml2: x.x

recipes/libsbml/meta.yaml

@@ -0,0 +1,61 @@
+{% set name = "libsbml" %}
+{% set version = "5.20.4" %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+source:
+  url: https://github.com/sbmlteam/libsbml/archive/refs/tags/v{{ version }}.tar.gz
+  sha256: 02c225d3513e1f5d6e3c0168456f568e67f006eddaab82f09b4bdf0d53d2050e
+  
+build:
+  number: 0
+  run_exports:
+    - {{ pin_subpackage('libsbml', max_pin='x.x') }}
+
+requirements:
+  build:
+    - {{ compiler('c') }}
+    - {{ stdlib('c') }}
+    - {{ compiler('cxx') }}
+    - cmake
+    - make  # [not win]
+    - ninja  # [win]
+    
+  host:
+    - zlib
+    - bzip2
+    - libxml2
+  
+test:
+  commands:
+    - test -f "${PREFIX}/lib/libsbml${SHLIB_EXT-.so}"  # [linux]
+    - test -f "${PREFIX}/lib/libsbml${SHLIB_EXT-.dylib}"  # [osx]    
+    - if not exist %PREFIX%/Library/bin/libsbml.dll exit 1  # [win]
+    - test -f "${PREFIX}/include/sbml/SBase.h"  # [not win]    
+    - if not exist %PREFIX%/Library/include/sbml/SBase.h exit 1  # [win]
+    - test -f "${PREFIX}/lib/cmake/sbml-config.cmake"  # [not win]
+    - if not exist %PREFIX%/Library/lib/cmake/libsbml-config.cmake exit 1  # [win]
+    - test -f "${PREFIX}/lib/pkgconfig/libsbml.pc"  # [not win]
+    
+    
+about:
+  home: http://sbml.org/software/libsbml/
+  summary: 'Non-official conda package of libSBML with all available packages'
+  description: |
+    LibSBML is a free, open-source programming library to help you read, write, manipulate, translate, and validate SBML files and data streams.
+    This is a non-official conda package of libSBML with all available packages, working for linux-64, linux-aarch64, osx-64, osx-arm64 and win-64. 
+    This version was compiled with CPP namespace ON.
+  
+  license: LGPL-2.1-only
+  license_family: LGPL
+  
+  license_file: LICENSE.txt
+  
+  doc_url: https://sbml.org/software/libsbml/libsbml-docs/api/c++/
+  dev_url: https://github.com/sbmlteam/libsbml/
+
+extra:
+  recipe-maintainers:
+    - vincent-noel