I can't access the Pangolin web application

[Chika2338]

Hello. I've been trying to access the Pangolin web application for the past few days, but I'm having trouble. When will it be back up and running? Or is there a new web address? Please let me know.

[AngieHinrichs]

@t-whalley do you know if anyone is still maintaining https://pangolin.cog-uk.io/ ?

In the meantime @Chika2338 you can upload sequences to https://usher.bio to have them placed on the tree of all SARS-CoV-2 sequences, and that will tell you the lineage(s) in which your sequences are placed.

[Chika2338]

@AngieHinrichs Thank you for telling me. I'll give it a try.

@t-whalley　Please let me know if you find out anything about pangolins.

[wm75]

@Chika2338 or, alternatively, you can also use pangolin through public Galaxy servers like usegalaxy.eu:
https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/iuc/pangolin/pangolin/4.3.4+galaxy2

[t-whalley]

Hi both, sorry I just saw this. I am not sure but I'll try and find out and report back 😄

[Chika2338]

@wm75 Thank you for telling me.
It seems I can get by for now with the site @AngieHinrichs introduced to me.
But if it becomes necessary, I will consider it.