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scregclust 0.2.3

  • Fixed a small bug in NNLS step-size selection
  • Converted articles from RMarkdown to Quarto

scregclust 0.2.2

  • Vignettes relied heavily on downloading data. Make vignettes articles that appear on the website but not in the actual package, since it is expected that anybody profiting from the vignettes will have an active internet connection anyways.

scregclust 0.2.1

  • Added a vignette illustrating how to supply your own regulator list

scregclust 0.2.0-1

  • Regulator importance was computed unnecessarily if there is only one regulator. A single regulator is always the most important regulator for a cluster.

scregclust 0.2.0

New features

  • Quick Mode: Instead of trying to re-allocate all target genes that were allocated into the noise cluster, only a certain (random) percentage of these target genes is attempted to be re-allocated.

    quick_mode = TRUE has to be supplied as an argument to scregclust to activate this feature (off by default) and the percentage of noise target genes to re-allocate is given by quick_mode_percent, a number in [0, 1).

Minor changes

  • Added CRAN install instructions to the README

scregclust 0.1.0

  • First release on CRAN