Support RO-Crate 1.2

[simleo]

Resources:

• The spec
• The changelog
• A human-friendly list of changes
• Specification quick reference

[stain]

RO-Crate 1.2 has changed in the context the mapping for input and output:

From https://www.researchobject.org/ro-crate/specification/1.2/metadata.html#additional-metadata-standards

ComputationalWorkflow mapped to https://bioschemas.org/ComputationalWorkflow
FormalParameter mapped to https://bioschemas.org/FormalParameter
input mapped to https://bioschemas.org/properties/input
output mapped to https://bioschemas.org/properties/output

[elichad]

@kikkomep @simleo do you have a timeline in mind for this support? (asking because we're building validation for a profile which depends on 1.2)

[ilveroluca]

We started looking at this a few weeks ago @elichad, so it shouldn't be too long before we have something running.

Are you writing a new validation profile to plug into rocrate-validator?

[elichad]

great news @ilveroluca, thanks :)

We are writing validation for the Five Safes RO-Crate profile; we plan to open a PR to add it to this repo when it's ready (unless you would prefer that we host it elsewhere and plug it in?). You can see our progress on our fork: https://github.com/eScienceLab/rocrate-validator/tree/develop/rocrate_validator/profiles/five-safes-crate

[ilveroluca]

We are writing validation for the Five Safes RO-Crate profile;

Nice 👍

we plan to open a PR to add it to this repo when it's ready (unless you would prefer that we host it elsewhere and plug it in?).

We're all in favour of adding the validation to this repo, as long as you're happy to maintain it :-)

[simleo]

See also ResearchObject/workflow-run-crate#101 (comment) and following comments.