Add Rust quality checks #243
Workflow file for this run
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| name: quality | ||
| on: | ||
| push: | ||
| pull_request: | ||
| branches: [main] | ||
| jobs: | ||
| python: | ||
| runs-on: ubuntu-latest | ||
| name: Python | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: ruff check | ||
| uses: astral-sh/ruff-action@v3 | ||
| with: | ||
| src: >- | ||
| mygfa | ||
| slow_odgi | ||
| pollen_data_gen | ||
| flatgfa-py | ||
| - name: ruff format | ||
| uses: astral-sh/ruff-action@v3 | ||
| with: | ||
| args: "format --check --diff" | ||
| src: >- | ||
| mygfa | ||
| slow_odgi | ||
| pollen_data_gen | ||
| flatgfa-py | ||
| - name: Install uv | ||
| uses: astral-sh/setup-uv@v5 | ||
| - name: mypy | ||
| run: MYPYPATH=mygfa uv tool run mypy --no-namespace-packages --disallow-untyped-defs mygfa slow_odgi pollen_data_gen | ||
| rust: | ||
| runs-on: ubuntu-latest | ||
| name: Rust | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - uses: uses: dtolnay/rust-toolchain@stable | ||
| - run: cargo check | ||
| - run: cargo clippy | ||
| - run: cargo fmt --check | ||
