Combine latency and filesize tests into one file #515
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| name: quality | |
| on: | |
| push: | |
| pull_request: | |
| branches: [main] | |
| jobs: | |
| python: | |
| runs-on: ubuntu-latest | |
| name: Python | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: ruff check | |
| uses: astral-sh/ruff-action@v3 | |
| with: | |
| src: >- | |
| mygfa | |
| slow_odgi | |
| pollen_data_gen | |
| flatgfa-py | |
| - name: ruff format | |
| uses: astral-sh/ruff-action@v3 | |
| with: | |
| args: "format --check --diff" | |
| src: >- | |
| mygfa | |
| slow_odgi | |
| pollen_data_gen | |
| flatgfa-py | |
| - name: Install uv | |
| uses: astral-sh/setup-uv@v5 | |
| - name: mypy | |
| run: MYPYPATH=mygfa uv tool run mypy --no-namespace-packages --disallow-untyped-defs mygfa slow_odgi pollen_data_gen | |
| rust: | |
| runs-on: ubuntu-latest | |
| name: Rust | |
| env: | |
| RUSTFLAGS: "-Dwarnings" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - run: rustup toolchain install stable --no-self-update | |
| - uses: Swatinem/rust-cache@v2 | |
| - run: cargo check | |
| - run: cargo clippy | |
| - run: cargo fmt --check |