diff --git a/CHANGELOG.md b/CHANGELOG.md index 31de2a2..35534ec 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,6 +3,12 @@ Observes [Semantic Versioning](https://semver.org/spec/v2.0.0.html) standard and [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) convention. +## [0.5.0] - 2024-02-05 + ++ Add - New visualization for plotting ROI masks over motion-corrected summary images ++ Remove - `Curation` table from `miniscope.py` ++ Update - `CaImAn` installation management + ## [0.4.2] - 2024-01-29 + Fix - `element-interface` required during package installation @@ -68,6 +74,7 @@ Observes [Semantic Versioning](https://semver.org/spec/v2.0.0.html) standard and + Add - Load data acquired with Miniscope-DAQ-V3 + Add - Load data analyzed with MiniscopeAnalysis +[0.5.0]: https://github.com/datajoint/element-miniscope/releases/tag/0.5.0 [0.4.0]: https://github.com/datajoint/element-miniscope/releases/tag/0.4.0 [0.3.2]: https://github.com/datajoint/element-miniscope/releases/tag/0.3.2 [0.3.1]: https://github.com/datajoint/element-miniscope/releases/tag/0.3.1 diff --git a/element_miniscope/miniscope.py b/element_miniscope/miniscope.py index 38c7d51..43dc4ec 100644 --- a/element_miniscope/miniscope.py +++ b/element_miniscope/miniscope.py @@ -640,14 +640,6 @@ class Processing(dj.Computed): package_version='' : varchar(16) """ - class File(dj.Part): - definition = """ - -> master - file_name: varchar(255) # file name - --- - file: filepath@miniscope-processed - """ - def make(self, key): """ Execute the miniscope analysis defined by the ProcessingTask. @@ -726,18 +718,6 @@ def make(self, key): raise ValueError(f"Unknown task mode: {task_mode}") self.insert1(key) - self.File.insert( - [ - { - **key, - "file_name": f.relative_to(output_dir).as_posix(), - "file": f, - } - for f in output_dir.rglob("*") - if f.is_file() - ], - ignore_extra_fields=True, - ) # Motion Correction -------------------------------------------------------------------- diff --git a/element_miniscope/version.py b/element_miniscope/version.py index 2f158f7..20b1b3e 100644 --- a/element_miniscope/version.py +++ b/element_miniscope/version.py @@ -1,3 +1,3 @@ """Package metadata""" -__version__ = "0.4.2" +__version__ = "0.5.0"