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lines changed Original file line number Diff line number Diff line change @@ -22,10 +22,18 @@ DataJoint Elements collectively standardize and automate data collection and ana
2222 git clone https://github.com/< enter_github_username> /element-moseq.git
2323 ```
2424
25+ + Install [ Conda] ( https://docs.conda.io/en/latest/miniconda.html ) .
26+
27+ + Create and activate a Conda environment:
28+ ``` bash
29+ conda env create -f conda_env.yml
30+ conda activate element_moseq
31+ ```
32+
2533+ Install with ` pip ` :
2634
2735 ``` bash
28- pip install -e .[keypoint-moseq]
36+ pip install -e .[kpms_cpu] # MacOS: pip install -e ".[kpms_cpu]"
2937 ```
3038
3139+ [ Interactive tutorial on GitHub Codespaces] ( https://github.com/datajoint/element-moseq#interactive-tutorial )
Original file line number Diff line number Diff line change @@ -34,7 +34,9 @@ elements = [
3434 " element-interface @ git+https://github.com/datajoint/element-interface.git" ,
3535 " element-animal @ git+https://github.com/datajoint/element-animal.git" ,
3636]
37- kpms = [" jax<0.7.0" , " keypoint-moseq @ git+https://github.com/dattalab/keypoint-moseq.git" ]
37+ kpms_cpu = [" jax<0.7.0" , " keypoint-moseq @ git+https://github.com/dattalab/keypoint-moseq.git" ]
38+ kpms_gpu = [" jax<0.7.0" , " keypoint-moseq[cuda] @ git+https://github.com/dattalab/keypoint-moseq.git" ]
39+
3840tests = [
3941 " pytest" ,
4042 " pytest-cov" ,
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