Possible bug in plotting functions in analysis.py

[xun468]

Hi!

I was doing some work with plotting and noticed a possible bug in plot_transition_graph_group and visualize_transition_bigram in analysis.py. Both methods indicate that you select groups by name, however lines

keypoint-moseq/keypoint_moseq/analysis.py

Line 1472 in 4fef46e

trans_mats[i][:max_syllables, :max_syllables],

and

keypoint-moseq/keypoint_moseq/analysis.py

Line 1578 in 4fef46e

G = nx.from_numpy_array(trans_mats[i] * 100)

indicate that you grab the first i-th transition matrices in the transition matrix list, which may not necessarily be the ones selected.

Just wanted to point this out in case it's a bug.

[JRJacoby]

Where is it indicated that groups are selected by name? I believe both of them expect to be passed a groups list and a trans_mats list that are index-aligned.