-
Notifications
You must be signed in to change notification settings - Fork 8
/
Copy pathwercker.yml
377 lines (306 loc) · 15.4 KB
/
wercker.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
box: davidsblom/deal-fsi
command-timeout: 60
build:
steps:
- script:
name: install packages
code: |
apt-get clean && apt-get -qq update
apt-get -y install git build-essential zlib1g-dev libreadline-dev libncurses-dev libxt-dev libopenmpi-dev openmpi-bin wget cmake petsc-dev gfortran python bison flex python-pip lcov cppcheck libpython-dev python-dev
pip install codecov
- script:
name: boost
code: |
export METIS_VERSION=5.1.0
export PARMETIS_VERSION=4.0.3
export DEALII_VERSION=8.4.1
export BOOST_VERSION=1_55_0
export BOOST_VERSION_DOT=1.55.0
if [ -f "$WERCKER_CACHE_DIR/boost_${BOOST_VERSION}.tar.bz2" ]; then
debug "boost library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/boost_${BOOST_VERSION}.tar.bz2 ./
else
wget -O boost_${BOOST_VERSION}.tar.bz2 http://downloads.sourceforge.net/project/boost/boost/${BOOST_VERSION_DOT}/boost_${BOOST_VERSION}.tar.bz2
rsync -azvh boost_${BOOST_VERSION}.tar.bz2 $WERCKER_CACHE_DIR/
fi
tar jxf boost_${BOOST_VERSION}.tar.bz2
ln -s boost_${BOOST_VERSION} boost
- script:
name: eigen
code: |
export EIGEN_VERSION=3.2.8
if [ -f "$WERCKER_CACHE_DIR/eigen-${EIGEN_VERSION}.tar.bz" ]; then
debug "eigen library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/eigen-${EIGEN_VERSION}.tar.bz ./
else
wget -O eigen-${EIGEN_VERSION}.tar.bz http://bitbucket.org/eigen/eigen/get/${EIGEN_VERSION}.tar.bz2
rsync -azvh eigen-${EIGEN_VERSION}.tar.bz $WERCKER_CACHE_DIR/
fi
tar jxf eigen-${EIGEN_VERSION}.tar.bz
ln -s eigen-eigen-07105f7124f9 eigen
- script:
name: metis
code: |
export METIS_VERSION=5.1.0
if [ -f "$WERCKER_CACHE_DIR/metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz" ]; then
debug "metis library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz ./
tar -zxf metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz
ln -s metis-${METIS_VERSION} metis
else
wget http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-${METIS_VERSION}.tar.gz
tar -zxf metis-${METIS_VERSION}.tar.gz
rm metis-${METIS_VERSION}.tar.gz
ln -s metis-${METIS_VERSION} metis
cd metis-${METIS_VERSION}
export CC=mpicc
export CXX=mpicxx
make config prefix=`pwd`/build
make install
cd ../
tar -zcf metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz metis-${METIS_VERSION}
rsync -azvh metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz $WERCKER_CACHE_DIR/
fi
- script:
name: parmetis
code: |
export PARMETIS_VERSION=4.0.3
if [ -f "$WERCKER_CACHE_DIR/parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz" ]; then
debug "parmetis library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz ./
tar -zxf parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz
ln -s parmetis-${PARMETIS_VERSION} parmetis
else
debug "parmetis library not found in cache, will download and compile"
wget http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/parmetis-${PARMETIS_VERSION}.tar.gz
tar -zxf parmetis-${PARMETIS_VERSION}.tar.gz
rm parmetis-${PARMETIS_VERSION}.tar.gz
ln -s parmetis-${PARMETIS_VERSION} parmetis
cd parmetis-${PARMETIS_VERSION}
export CC=mpicc
export CXX=mpicxx
make config prefix=`pwd`/build
make install
cd ../
tar -zcf parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz parmetis-${PARMETIS_VERSION}
rsync -azvh parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz $WERCKER_CACHE_DIR/
fi
- script:
name: deal.II
code: |
export DEALII_VERSION=8.4.1
if [ -f "$WERCKER_CACHE_DIR/dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz" ]; then
debug "deal.II library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz ./
tar -zxf dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz
ln -s dealii-${DEALII_VERSION} dealii
else
debug "deal.II library not found in cache, will download and compile"
echo $WERCKER_CACHE_DIR
ls -lah $WERCKER_CACHE_DIR/
wget https://github.com/dealii/dealii/releases/download/v${DEALII_VERSION}/dealii-${DEALII_VERSION}.tar.gz
tar -zxf dealii-${DEALII_VERSION}.tar.gz
ln -s dealii-${DEALII_VERSION} dealii
rm dealii-${DEALII_VERSION}.tar.gz
export CC=mpicc
export CXX=mpicxx
export F77=mpif77
export F90=mpif90
export METIS_DIR=`pwd`/metis
export PARMETIS_DIR=`pwd`/parmetis
cd dealii-${DEALII_VERSION}
mkdir build
mkdir bin
cd build
cmake -DCMAKE_INSTALL_PREFIX=`pwd`/../bin ..
make -j `nproc` install
cd ../../
rm -rf dealii-${DEALII_VERSION}/build
tar -zcf dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz dealii-${DEALII_VERSION}
rsync -azvh dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz $WERCKER_CACHE_DIR/
fi
- script:
name: compile deal-fsi
code: |
cmake -DDEAL_II_DIR=dealii/bin/ .
make debug
make release
- script:
name: run test suite with MPI
code: mpirun -np 2 ./main
- script:
name: run test suite
code: ./main
- script:
name: code coverage
code: codecov --token=${CODECOV_TOKEN}
- script:
name: cppcheck
code: (cd src && cppcheck --error-exitcode=1 --enable=all .)
- script:
name: cleanup
code: rm -rf *
gcc-5:
box: davidsblom/deal-fsi-testing
steps:
- script:
name: install packages
code: |
apt-get clean && apt-get -qq update
apt-get -y install git build-essential zlib1g-dev libreadline-dev libncurses-dev libxt-dev libopenmpi-dev openmpi-bin wget cmake gfortran python bison flex python-pip lcov cppcheck libpython-dev python-dev
- script:
name: boost
code: |
export METIS_VERSION=5.1.0
export PARMETIS_VERSION=4.0.3
export DEALII_VERSION=8.4.1
export BOOST_VERSION=1_55_0
export BOOST_VERSION_DOT=1.55.0
if [ -f "$WERCKER_CACHE_DIR/boost_${BOOST_VERSION}.tar.bz2" ]; then
debug "boost library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/boost_${BOOST_VERSION}.tar.bz2 ./
else
wget -O boost_${BOOST_VERSION}.tar.bz2 http://downloads.sourceforge.net/project/boost/boost/${BOOST_VERSION_DOT}/boost_${BOOST_VERSION}.tar.bz2
rsync -azvh boost_${BOOST_VERSION}.tar.bz2 $WERCKER_CACHE_DIR/
fi
tar jxf boost_${BOOST_VERSION}.tar.bz2
ln -s boost_${BOOST_VERSION} boost
- script:
name: eigen
code: |
export EIGEN_VERSION=3.2.8
if [ -f "$WERCKER_CACHE_DIR/eigen-${EIGEN_VERSION}.tar.bz" ]; then
debug "eigen library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/eigen-${EIGEN_VERSION}.tar.bz ./
else
wget -O eigen-${EIGEN_VERSION}.tar.bz http://bitbucket.org/eigen/eigen/get/${EIGEN_VERSION}.tar.bz2
rsync -azvh eigen-${EIGEN_VERSION}.tar.bz $WERCKER_CACHE_DIR/
fi
tar jxf eigen-${EIGEN_VERSION}.tar.bz
ln -s eigen-eigen-07105f7124f9 eigen
- script:
name: metis
code: |
export METIS_VERSION=5.1.0
if [ -f "$WERCKER_CACHE_DIR/metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz" ]; then
debug "metis library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz ./
tar -zxf metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz
ln -s metis-${METIS_VERSION} metis
else
wget http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-${METIS_VERSION}.tar.gz
tar -zxf metis-${METIS_VERSION}.tar.gz
rm metis-${METIS_VERSION}.tar.gz
ln -s metis-${METIS_VERSION} metis
cd metis-${METIS_VERSION}
export CC=mpicc
export CXX=mpicxx
make config prefix=`pwd`/build
make install
cd ../
tar -zcf metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz metis-${METIS_VERSION}
rsync -azvh metis-${METIS_VERSION}-${BUILD_KEY}.tar.gz $WERCKER_CACHE_DIR/
fi
- script:
name: parmetis
code: |
export PARMETIS_VERSION=4.0.3
if [ -f "$WERCKER_CACHE_DIR/parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz" ]; then
debug "parmetis library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz ./
tar -zxf parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz
ln -s parmetis-${PARMETIS_VERSION} parmetis
else
debug "parmetis library not found in cache, will download and compile"
wget http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/parmetis-${PARMETIS_VERSION}.tar.gz
tar -zxf parmetis-${PARMETIS_VERSION}.tar.gz
rm parmetis-${PARMETIS_VERSION}.tar.gz
ln -s parmetis-${PARMETIS_VERSION} parmetis
cd parmetis-${PARMETIS_VERSION}
export CC=mpicc
export CXX=mpicxx
make config prefix=`pwd`/build
make install
cd ../
tar -zcf parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz parmetis-${PARMETIS_VERSION}
rsync -azvh parmetis-${PARMETIS_VERSION}-${BUILD_KEY}.tar.gz $WERCKER_CACHE_DIR/
fi
- script:
name: PETSc
code: |
export PETSC_VERSION=3.6.4
if [ -f "$WERCKER_CACHE_DIR/petsc-${PETSC_VERSION}-${BUILD_KEY}.tar.gz" ]; then
debug "petsc library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/petsc-${PETSC_VERSION}-${BUILD_KEY}.tar.gz ./
tar -zxf petsc-${PETSC_VERSION}-${BUILD_KEY}.tar.gz
ln -s petsc-${PETSC_VERSION} petsc
else
export PETSC_ARCH=x86_64
export PETSC_DIR=`pwd`/petsc-${PETSC_VERSION}
wget http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-lite-${PETSC_VERSION}.tar.gz -O - | tar xz
cd $PETSC_DIR
./config/configure.py --with-shared=1 \
--with-x=0 --with-cc=mpicc --with-cxx=mpicxx \
--with-fc=mpif77 --with-debugging=0 \
--download-mumps --download-scalapack \
--download-fblaslapack --download-hypre \
--download-ptscotch
make
cd ..
tar -zcf petsc-${PETSC_VERSION}-${BUILD_KEY}.tar.gz petsc-${PETSC_VERSION}
rsync -azvh petsc-${PETSC_VERSION}-${BUILD_KEY}.tar.gz $WERCKER_CACHE_DIR/
fi
- script:
name: deal.II
code: |
export DEALII_VERSION=8.4.1
export PETSC_VERSION=3.6.4
export PETSC_ARCH=x86_64
export PETSC_DIR=`pwd`/petsc-${PETSC_VERSION}
if [ -f "$WERCKER_CACHE_DIR/dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz" ]; then
debug "deal.II library found in cache"
rsync -azvh $WERCKER_CACHE_DIR/dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz ./
tar -zxf dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz
ln -s dealii-${DEALII_VERSION} dealii
else
debug "deal.II library not found in cache, will download and compile"
wget https://github.com/dealii/dealii/releases/download/v${DEALII_VERSION}/dealii-${DEALII_VERSION}.tar.gz -O - | tar xz
ln -s dealii-${DEALII_VERSION} dealii
export CC=mpicc
export CXX=mpicxx
export F77=mpif77
export F90=mpif90
export METIS_DIR=`pwd`/metis
export PARMETIS_DIR=`pwd`/parmetis
cd dealii-${DEALII_VERSION} && mkdir build bin && cd build
cmake -DDEAL_II_WITH_MPI=ON \
-DDEAL_II_WITH_METIS=ON \
-DDEAL_II_WITH_PETSC=ON \
-DDEAL_II_COMPONENT_EXAMPLES=OFF \
-DCMAKE_INSTALL_PREFIX=`pwd`/../bin \
..
cmake -DCMAKE_INSTALL_PREFIX=`pwd`/../bin ..
make -j `nproc` install
cd ../../
rm -rf dealii-${DEALII_VERSION}/build
tar -zcf dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz dealii-${DEALII_VERSION}
rsync -azvh dealii-${DEALII_VERSION}-${BUILD_KEY}.tar.gz $WERCKER_CACHE_DIR/
fi
- script:
name: compile deal-fsi
code: |
cmake -DDEAL_II_DIR=dealii/bin/ .
make debug
make release
- script:
name: run test suite with MPI
code: mpirun --allow-run-as-root -np 2 ./main
- script:
name: run test suite
code: ./main
- script:
name: cppcheck
code: (cd src && cppcheck --error-exitcode=1 --enable=all .)
- script:
name: cleanup
code: rm -rf * .git .gitignore