Skip to content

Latest commit

 

History

History

README.md

Biological Inspiration

Version: v1.2.3 | Status: Active | Last Updated: March 2026

Overview

Documentation exploring biological metaphors that inform the Codomyrmex architecture — myrmecology (ant science), swarm intelligence, stigmergy, eusociality, and free energy principles.

Contents

Document Description
eusociality.md Eusociality and division of labor in agent systems
evolution.md Evolutionary optimization and selection pressure
free_energy.md Free energy principle and active inference
immune_system.md Immune system metaphors for security and resilience
memory_and_forgetting.md Memory consolidation and strategic forgetting
metabolism.md Metabolic analogies for resource management
myrmecology.md Ant colony science and its mapping to code systems
stigmergy.md Stigmergic coordination through environmental signals
superorganism.md Superorganism theory — the colony as single entity
swarm_intelligence.md Swarm intelligence algorithms and patterns
symbiosis.md Symbiotic relationships between agents and tools

Coordination

  • AGENTS.md — Agent coordination for this section
  • SPEC.md — Functional specification
  • PAI.md — PAI infrastructure integration

Navigation