spectra/pyproject.toml at main · dpeerlab/spectra · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
[tool.poetry]
name = "scSpectra"
version = "0.2.0"
description = "Supervised discovery of interpretable gene programs from single-cell data"
authors = [
    "Russel Z. Kunes <KunesR@mskcc.org>",
    "Thomas Walle <t.walle@dkfz-heidelberg.de>"
]
maintainers = [
    "Russel Z. Kunes <KundesR@mskcc.org>",
    "Tobias Krause <krauset@mskcc.org>"
]
license = "MIT"
packages = [
    {include = "Spectra", from="src"},
    {include = "Spectra/load", from="src"},
]

[tool.poetry.dependencies]
python = "^3.8"
numpy = "^1.20.3"
scipy = "^1.7.3"
scanpy = "^1.8.2"
torch = "^1.10.1"
opt-einsum = "^3.3.0"
pandas = "^1.3.5"
tqdm = "^4.62.3"
pyvis = "^0.1.9"

[build-system]
requires = ["poetry-core>=1.0.0"]
build-backend = "poetry.core.masonry.api"

[tool.poetry.urls]
Publication = "https://www.nature.com/articles/s41587-023-01940-3"
bioRxiv = "https://www.biorxiv.org/content/10.1101/2022.12.20.521311v1"