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NAMESPACE
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42 lines (41 loc) · 1.14 KB
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# Generated by roxygen2: do not edit by hand
export(calculate_smart_ylimits)
export(convert_pcawg_to_sigprofiler_SBS96)
export(drop_enforced_signatures)
export(export_to_signatureanalyzer_word_SBS96)
export(export_to_sigprofiler_SBS96)
export(get_maximum_amount)
export(get_minimum_amount)
export(normalize_counts)
export(normalize_sample_counts)
export(per_sample_counts_summary)
export(per_sample_proportions_summary)
export(per_sample_summary)
export(plot_ID83_signature)
export(plot_SBS96_signature)
export(plot_activities)
export(plot_context)
export(plot_signature)
export(read_pcawg_SBS96_csv)
export(save_signature_plot)
export(signature_activity_figure)
export(tidy_sigprof_ID83_df)
export(tidy_sigprof_SBS96_df)
export(tidy_sigprof_activities)
export(tidy_sigprof_id83_probabilities)
export(tidy_sigprof_sbs96_probabilities)
export(transform_sigprofiler_df)
import(cowplot)
import(dplyr)
import(ggplot2)
import(hdf5r)
import(scales)
import(tibble)
import(tidyr)
importFrom(magrittr,"%>%")
importFrom(readr,read_csv)
importFrom(reshape2,melt)
importFrom(stats,reorder)
importFrom(stringr,str_sub)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,separate)