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nwb_docs/index.html

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@@ -2258,7 +2258,9 @@ <h3 id="custom-parameters">Custom Parameters<a class="headerlink" href="#custom-
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<span class="normal"> 9</span>
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<span class="normal">12</span></pre></div></td><td class="code"><div><pre><span></span><code><span class="n">filename</span> <span class="o">=</span> <span class="n">export_to_nwb</span><span class="p">(</span>
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<span class="normal">12</span>
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<span class="normal">13</span></pre></div></td><td class="code"><div><pre><span></span><code><span class="kn">from</span><span class="w"> </span><span class="nn">ethopy.utils.export.nwb</span><span class="w"> </span><span class="kn">import</span> <span class="n">export_to_nwb</span>
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<span class="n">filename</span> <span class="o">=</span> <span class="n">export_to_nwb</span><span class="p">(</span>
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<span class="n">animal_id</span><span class="o">=</span><span class="mi">123</span><span class="p">,</span>
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<span class="n">session_id</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span>
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<span class="n">experimenter</span><span class="o">=</span><span class="s2">&quot;Alex Smith&quot;</span><span class="p">,</span>
@@ -2278,7 +2280,11 @@ <h3 id="custom-filename">Custom Filename<a class="headerlink" href="#custom-file
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<span class="normal">6</span></pre></div></td><td class="code"><div><pre><span></span><code><span class="n">filename</span> <span class="o">=</span> <span class="n">export_to_nwb</span><span class="p">(</span>
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<span class="normal">8</span></pre></div></td><td class="code"><div><pre><span></span><code><span class="kn">from</span><span class="w"> </span><span class="nn">ethopy.utils.export.nwb</span><span class="w"> </span><span class="kn">import</span> <span class="n">export_to_nwb</span>
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<span class="n">filename</span> <span class="o">=</span> <span class="n">export_to_nwb</span><span class="p">(</span>
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<span class="n">animal_id</span><span class="o">=</span><span class="mi">123</span><span class="p">,</span>
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<span class="n">session_id</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span>
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<span class="n">output_filename</span><span class="o">=</span><span class="s2">&quot;TwoAFCexperiment_session_1.nwb&quot;</span><span class="p">,</span>
@@ -2290,7 +2296,11 @@ <h3 id="clarify-the-configuration-path">Clarify the configuration path<a class="
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<span class="normal">5</span></pre></div></td><td class="code"><div><pre><span></span><code><span class="n">filename</span> <span class="o">=</span> <span class="n">export_to_nwb</span><span class="p">(</span>
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<span class="normal">7</span></pre></div></td><td class="code"><div><pre><span></span><code><span class="kn">from</span><span class="w"> </span><span class="nn">ethopy.utils.export.nwb</span><span class="w"> </span><span class="kn">import</span> <span class="n">export_to_nwb</span>
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<span class="n">filename</span> <span class="o">=</span> <span class="n">export_to_nwb</span><span class="p">(</span>
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<span class="n">animal_id</span><span class="o">=</span><span class="mi">123</span><span class="p">,</span>
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<span class="n">session_id</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span>
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<span class="n">config_path</span><span class="o">=</span><span class="s2">&quot;/path/to/custom_config.json&quot;</span>
@@ -2401,7 +2411,11 @@ <h3 id="batch-export">Batch Export<a class="headerlink" href="#batch-export" tit
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<span class="normal">18</span></pre></div></td><td class="code"><div><pre><span></span><code><span class="c1"># Define sessions to export</span>
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<span class="normal">20</span></pre></div></td><td class="code"><div><pre><span></span><code><span class="kn">from</span><span class="w"> </span><span class="nn">ethopy.utils.export.nwb</span><span class="w"> </span><span class="kn">import</span> <span class="n">batch_export_to_nwb</span>
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<span class="c1"># Define sessions to export</span>
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<span class="n">animal_session_list</span> <span class="o">=</span> <span class="p">[</span>
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<span class="p">(</span><span class="mi">123</span><span class="p">,</span> <span class="mi">1</span><span class="p">),</span>
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<span class="p">(</span><span class="mi">123</span><span class="p">,</span> <span class="mi">2</span><span class="p">),</span>
@@ -2411,7 +2425,7 @@ <h3 id="batch-export">Batch Export<a class="headerlink" href="#batch-export" tit
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<span class="c1"># Batch export with common parameters</span>
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<span class="n">exported_files</span> <span class="o">=</span> <span class="n">batch_export_to_nwb</span><span class="p">(</span>
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<span class="n">sessions</span><span class="p">,</span>
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<span class="n">animal_session_list</span><span class="p">,</span>
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<span class="n">experimenter</span><span class="o">=</span><span class="s2">&quot;Dr. Smith&quot;</span><span class="p">,</span>
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<span class="n">lab</span><span class="o">=</span><span class="s2">&quot;Vision Lab&quot;</span><span class="p">,</span>
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<span class="n">institution</span><span class="o">=</span><span class="s2">&quot;FORTH IMBB&quot;</span><span class="p">,</span>

search/search_index.json

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sitemap.xml

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</url>
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</url>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/creating_custom_components/</loc>
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</url>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/dot_stimulus_example/</loc>
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</url>
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</url>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/local_conf/</loc>
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</url>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/match_port_example/</loc>
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</url>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/nwb_docs/</loc>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/plugin/</loc>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/raspberry_pi/</loc>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/setup_configuration_idx/</loc>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/task_setup/</loc>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/troubleshooting/</loc>
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</url>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/visualizations/</loc>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/API/behavior/</loc>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/API/experiment/</loc>
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</url>
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<loc>https://ef-lab.github.io/ethopy_package/API/logger/</loc>
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<loc>https://ef-lab.github.io/ethopy_package/API/stimulus/</loc>
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</url>
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</urlset>

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