From 7bca40167be3f1448429e14218c3957bf3cb1988 Mon Sep 17 00:00:00 2001 From: Bert Droesbeke <44875756+bedroesb@users.noreply.github.com> Date: Mon, 2 Oct 2023 14:51:42 +0200 Subject: [PATCH 1/2] Update third_party_tools.rst --- faq/third_party_tools.rst | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/faq/third_party_tools.rst b/faq/third_party_tools.rst index 9a865351..ac7b62b4 100644 --- a/faq/third_party_tools.rst +++ b/faq/third_party_tools.rst @@ -32,4 +32,12 @@ heard from users of them that they have been valuable. Available for the conversion of annotated DNA multi-sequence alignments in NEXUS format to an EMBL flat file suitable for submission via Webin-CLI. This was developed by Michael Gruenstaeudl and a paper is available with additional - detail. DOI: https://doi.org/10.1093/bioinformatics/btaa209 \ No newline at end of file + detail. DOI: https://doi.org/10.1093/bioinformatics/btaa209 + +`ENA upload cli `_ + This command line tool (CLI) allows easy submission of data and respective + metadata to the European Nucleotide Archive (ENA) using tabular files or an + excel spreadsheet. The tool allows programatic submission of all ENA objects + (study, sample, run and experiment) without the need of logging in to the + Webin interface. This also includes client side validation using ENA checklists + and releasing the ENA objects. From 8b633224a27608c13cd17b1f97610f7715fa5319 Mon Sep 17 00:00:00 2001 From: Bert Droesbeke <44875756+bedroesb@users.noreply.github.com> Date: Mon, 2 Oct 2023 14:53:26 +0200 Subject: [PATCH 2/2] Update third_party_tools.rst --- faq/third_party_tools.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/faq/third_party_tools.rst b/faq/third_party_tools.rst index ac7b62b4..039945a0 100644 --- a/faq/third_party_tools.rst +++ b/faq/third_party_tools.rst @@ -35,7 +35,7 @@ heard from users of them that they have been valuable. detail. DOI: https://doi.org/10.1093/bioinformatics/btaa209 `ENA upload cli `_ - This command line tool (CLI) allows easy submission of data and respective + Command line tool (CLI) allowing easy submission of data and respective metadata to the European Nucleotide Archive (ENA) using tabular files or an excel spreadsheet. The tool allows programatic submission of all ENA objects (study, sample, run and experiment) without the need of logging in to the