Skip to content

Upgrade Snakemake & SLURM executor plugin to latest versions #84

Description

@sreichl
  • upgrade to latest Snakemake version (adapt docs/README)
    • change memory requirements in all configs to be integer and not strings otherwise error in Snakemake 9
  • upgrade to latest SLURM executor plugin
  • rerun all recipes for test (& debug)
  • check if there is a breaking change that would warrant a version bump

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions