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267 lines (234 loc) · 8.49 KB
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from __future__ import annotations
import logging
from collections import defaultdict
from datetime import datetime, timedelta
from typing import cast
from uuid import UUID, uuid4
from fastapi import HTTPException, Request
from pydantic import TypeAdapter, ValidationError
from sqlalchemy import select
from sqlalchemy.exc import IntegrityError
from sqlalchemy.orm import Session
import acidwatch_api.database as db
from acidwatch_api.broker.heartbeat import HeartbeatRegistry
from acidwatch_api.settings import SETTINGS
from acidwatch_messaging import Transport
from acidwatch_models import (
AdapterSet,
BaseAdapter,
InputError,
)
from acidwatch_models.datamodel import (
AnyPanel,
Conditions,
ModelInput,
ModelResult,
Phase,
Simulation,
SimulationResult,
)
logger = logging.getLogger(__name__)
def get_transport(request: Request) -> Transport:
return cast(Transport, request.state.transport)
def get_heartbeat_registry(request: Request) -> HeartbeatRegistry:
return cast(HeartbeatRegistry, request.state.heartbeat_registry)
def _now() -> datetime:
return datetime.now()
def build_adapters(
models: list[ModelInput],
conditions: Conditions,
all_adapters: AdapterSet,
) -> list[BaseAdapter]:
"""Instantiate and validate the adapter chain for a set of model inputs.
Raises:
HTTPException: 422 if a model is unknown or its parameters are invalid.
"""
adapters: list[BaseAdapter] = []
for model in models:
adapter_class = all_adapters.get(model.model_id)
if adapter_class is None:
raise HTTPException(
status_code=422,
detail=f"Unknown model '{model.model_id}'",
)
try:
adapter = adapter_class(
parameters=model.parameters,
conditions=conditions,
)
adapters.append(adapter)
except InputError as exc:
raise HTTPException(status_code=422, detail=exc.detail)
except ValidationError as exc:
detail = defaultdict(list)
for err in exc.errors():
for loc in err["loc"]:
detail[loc].append(err["msg"])
raise HTTPException(status_code=422, detail=dict(detail))
except ValueError as exc:
raise HTTPException(status_code=422, detail=exc.args)
return adapters
def build_model_input_rows(models: list[ModelInput]) -> list[db.ModelInput]:
"""Build the chained ``db.ModelInput`` rows for a simulation."""
rows: list[db.ModelInput] = []
previous_model_input_id: UUID | None = None
for model in models:
model_input_id = uuid4()
rows.append(
db.ModelInput(
id=model_input_id,
previous_model_input_id=previous_model_input_id,
model_id=model.model_id,
parameters=model.parameters,
)
)
previous_model_input_id = model_input_id
return rows
def order_chain(
rows: list[tuple[db.ModelInput, db.ModelResult | None]],
) -> list[tuple[db.ModelInput, db.ModelResult | None]]:
"""Order ``(model_input, result)`` rows following the pipeline chain."""
mapping: dict[UUID | None, UUID] = {}
rows_by_id: dict[UUID, tuple[db.ModelInput, db.ModelResult | None]] = {}
for model_input, result in rows:
mapping[model_input.previous_model_input_id] = model_input.id
rows_by_id[model_input.id] = (model_input, result)
ordered: list[tuple[db.ModelInput, db.ModelResult | None]] = []
current_id: UUID | None = mapping.get(None)
while current_id in rows_by_id:
assert current_id is not None
ordered.append(rows_by_id[current_id])
current_id = mapping.get(current_id)
return ordered
def query_chain_rows(
session: Session, simulation_id: UUID
) -> list[tuple[db.ModelInput, db.ModelResult | None]]:
q = (
select(db.ModelInput, db.ModelResult)
.where(db.ModelInput.simulation_id == simulation_id)
.outerjoin(db.ModelResult)
)
return [(row[0], row[1]) for row in session.execute(q).fetchall()]
def _phases_to_concentrations(phases: list[Phase]) -> dict[str, int | float]:
merged: dict[str, int | float] = {}
for phase in phases:
if phase.kind == "co2-rich":
merged.update(phase.concentrations)
return merged
def build_simulation_result(
session: Session,
simulation_id: UUID,
registry: HeartbeatRegistry | None = None,
) -> SimulationResult:
db_simulation = session.get_one(db.Simulation, simulation_id)
model_inputs: list[ModelInput] = []
results: list[ModelResult] = []
pending = False
processing = False
now = _now()
previous_result_created_at: datetime | None = None
for model_input, result in order_chain(query_chain_rows(session, simulation_id)):
model_inputs.append(
ModelInput(
model_id=model_input.model_id,
parameters=model_input.parameters,
)
)
if not result:
if pending:
continue
pending = True
if (
registry is not None
and registry.job_status(str(model_input.id), now=now) == "processing"
):
processing = True
continue
pending_since = previous_result_created_at or model_input.created_at
if now - pending_since >= timedelta(
minutes=SETTINGS.model_input_timeout_minutes
):
result = db.ModelResult(
model_input_id=model_input.id,
phases=[],
panels=[],
error=f"Model {model_input.model_id} timed out",
)
session.add(result)
try:
session.commit()
except IntegrityError:
session.rollback()
result = session.scalar(
select(db.ModelResult).where(
db.ModelResult.model_input_id == model_input.id
)
)
assert result is not None
logger.error(
"Simulation %s failed: %s",
simulation_id,
result.error,
)
return SimulationResult(
status="error",
input=Simulation(
concentrations=_phases_to_concentrations(
[Phase(**p) for p in db_simulation.phases]
),
conditions=Conditions(**(db_simulation.conditions or {})),
models=model_inputs,
),
results=results,
error=result.error,
)
continue
previous_result_created_at = result.created_at
if result.error is not None:
logger.error("Simulation %s failed: %s", simulation_id, result.error)
return SimulationResult(
status="error",
input=Simulation(
concentrations=_phases_to_concentrations(
[Phase(**p) for p in db_simulation.phases]
),
conditions=Conditions(**(db_simulation.conditions or {})),
models=model_inputs,
),
results=results,
error=result.error,
)
results.append(
ModelResult(
phases=[Phase(**p) for p in result.phases],
panels=result.panels,
)
)
simulation_input = Simulation(
concentrations=_phases_to_concentrations(
[Phase(**p) for p in db_simulation.phases]
),
conditions=Conditions(**(db_simulation.conditions or {})),
models=model_inputs,
)
if pending:
return SimulationResult(
status="processing" if processing else "pending",
input=simulation_input,
results=results,
)
return SimulationResult(
status="done",
input=simulation_input,
results=[
ModelResult(
phases=result.phases,
panels=[
TypeAdapter(AnyPanel).validate_python(panel)
for panel in result.panels
],
)
for result in results
if result is not None
],
)