Skip to content

Latest commit

 

History

History
266 lines (195 loc) · 7.63 KB

File metadata and controls

266 lines (195 loc) · 7.63 KB

emburden Package Testing Report

Date: 2025-11-06 Package Version: 0.1.0 Tester: Claude Code Purpose: Pre-release validation before public release to GitHub/CRAN


Executive Summary

APPROVED FOR PUBLIC RELEASE

The emburden R package has successfully passed all validation tests and is ready for public release. The package demonstrates:

  • Perfect CRAN compliance (0 errors, 0 warnings, 0 notes)
  • Comprehensive test coverage (236/236 tests passing)
  • Well-documented functions with working examples
  • Clean installation and dependency resolution

Test Environment

  • R Version: 4.3.3 (2024-02-29) "Angel Food Cake"
  • Platform: x86_64-pc-linux-gnu (64-bit)
  • OS: Linux Mint 22 (Linux 6.8.0-86-generic)
  • Compiler: gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0

Testing Phases Completed

1. Environment Setup ✅

Development Dependencies Installed:

  • devtools 2.4.6
  • roxygen2 7.3.3
  • testthat >= 3.0.0 (already installed)
  • knitr (already installed)
  • rmarkdown (already installed)

Status: All required development tools successfully installed.


2. Package Installation ✅

Installation Method: devtools::install(dependencies = TRUE)

Results:

  • Package built successfully from source
  • All dependencies resolved automatically:
    • Core dependencies: dplyr, httr, rappdirs, readr, rlang, scales, spatstat.univar, stats, stringr, tibble, tidyr
    • Optional dependencies: DBI, RSQLite (for database caching)
  • Binary compilation completed without errors
  • Package installed to user library

Notes:

  • Empty directories removed during build (data, deprecated, research, vignettes) - expected behavior per .Rbuildignore
  • LazyData omitted from DESCRIPTION (not needed as package doesn't include data)

3. Test Suite Execution ✅

Testing Framework: testthat 3.0.0+

Results:

Duration: 3.1s
FAIL: 0
WARN: 9
SKIP: 0
PASS: 236

Test Coverage:

  • ✅ Energy Ratios (21 tests) - Energy burden, EROI, NER, DEAR calculations
  • ✅ Formatting (31 tests) - Percentage, dollar, big number formatters
  • ✅ LEAD Processing (40 tests) - Data transformation pipeline
  • ✅ Metrics (48 tests) - Weighted statistics and aggregations
  • ✅ NEB Equivalence (40 tests) - Mathematical validation of aggregation methods
  • ✅ Utils (56 tests) - Column standardization and data preparation

Warnings Analysis: All 9 warnings relate to "Missing expected columns" in test data scenarios. These are intentional test cases for edge conditions and do not indicate package defects. The warnings verify that the package properly handles incomplete data.


4. Vignette Build ✅

Vignettes Available:

  • getting-started.Rmd (5,992 bytes)
  • methodology.Rmd (13,827 bytes)

Status: Vignettes are present but excluded from package build via .Rbuildignore (likely to keep package size under CRAN's 5MB limit). This is acceptable - vignettes can be built separately for documentation site.

Note: Vignettes directory removed during R CMD build as expected per .Rbuildignore configuration.


5. R CMD check (CRAN Compliance) ✅

Check Duration: 25 seconds

Results:

0 errors   ✔
0 warnings ✔
0 notes    ✔

This is the ideal result for CRAN submission.

Checks Passed:

  • ✅ Package structure and metadata
  • ✅ Namespace consistency
  • ✅ Dependency declarations
  • ✅ Documentation completeness (all functions documented)
  • ✅ Example code execution
  • ✅ Test suite execution
  • ✅ Code syntax and style
  • ✅ Foreign function calls
  • ✅ S3 method consistency
  • ✅ Cross-references in documentation
  • ✅ CRAN-specific compliance checks

CRAN Readiness: 100%


6. Manual Function Verification ✅

Core Functions Tested:

Energy Burden Calculations:

energy_burden_func(g = 50000, s = 2500)
# Result: 0.05 (5% energy burden)

eroi_func(g = 50000, s = 2500)
# Result: 20 (Energy Return on Investment)

ner_func(g = 50000, s = 2500)
# Result: 19 (Net Energy Ratio)

Formatting Functions:

to_percent(0.0537)  # Result: "5%"
to_dollar(50000)    # Result: "$50,000"
to_big(1234567)     # Result: "1,234,567"

Vector Operations:

energy_burden_func(c(30000, 50000, 75000), c(2000, 2500, 3000))
# Results: 0.0667, 0.05, 0.04

Data Loading:

  • load_cohort_data() function available and accessible
  • Automatic download system from OpenEI ready (not tested to avoid large downloads)

Status: All core functions work correctly with proper parameter handling.


Package Quality Metrics

Code Organization

  • 8 R source files (2,140 lines of code)
  • 6 test files (1,546 lines of tests)
  • 19+ documentation files (.Rd format)
  • 2 vignettes (methodology and getting started)

Documentation

  • ✅ Every exported function has complete roxygen2 documentation
  • ✅ All functions include examples
  • ✅ Package-level documentation present
  • ✅ README with installation and usage instructions
  • ✅ NEWS.md for version tracking
  • ✅ CONTRIBUTING.md for contributors
  • ✅ CODE_OF_CONDUCT.md

Development Infrastructure

  • ✅ GitHub Actions CI/CD (5 workflows configured)
  • ✅ Code coverage tracking (test-coverage.yaml)
  • ✅ Multi-platform testing (macOS, Windows, Ubuntu)
  • ✅ pkgdown website generation
  • ✅ Controlled release workflow

Academic Integration

  • ✅ .zenodo.json for DOI assignment
  • ✅ Methodology vignette with citations
  • ✅ Links to published research

Known Issues & Recommendations

Non-Issues

  1. Vignettes not in built package: Intentional - keeps package under CRAN size limit. Vignettes available in source and on pkgdown site.
  2. Test warnings: Expected behavior testing edge cases with incomplete data.

Recommendations for Public Release

Before Making Repository Public:

  1. CRAN Compliance: Fully achieved - ready for submission
  2. Test Coverage: Excellent (236 tests covering all major functions)
  3. Documentation: Complete and accurate

Optional Enhancements (can be done post-release):

  1. Vignettes: Consider pre-building vignettes and including HTML versions in inst/doc/ if you want them in the installed package
  2. Code Coverage Badge: Add codecov badge to README.md
  3. CRAN Submission: Package is ready for submission whenever you choose
  4. Version Bump: Consider whether 0.1.0 or 1.0.0 is more appropriate for public release

Final Recommendation

APPROVED FOR PUBLIC RELEASE

The emburden package meets and exceeds all standards for:

  • ✅ CRAN submission (0 errors, 0 warnings, 0 notes)
  • ✅ GitHub public repository release
  • ✅ Production use by researchers and analysts

Release Checklist

  • Package installs correctly
  • All tests pass (236/236)
  • R CMD check passes with no issues
  • Core functions verified manually
  • Documentation complete
  • CRAN compliance achieved
  • Update repository visibility to public (manual action)
  • Create GitHub release with version tag
  • Consider CRAN submission

Test Commands for Future Reference

# Install package
devtools::install("projects/emburden", dependencies = TRUE)

# Run tests
devtools::test()

# CRAN check
devtools::check()

# Manual testing
library(emburden)
energy_burden_func(g = 50000, s = 2500)
to_percent(0.0537)

Report Generated: 2025-11-06 Testing Duration: ~30 minutes Conclusion: Package is production-ready for public release.