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backfill.go
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539 lines (473 loc) · 18.9 KB
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package main
import (
"bytes"
"context"
"database/sql"
"encoding/base64"
"fmt"
"slices"
"strconv"
"strings"
"github.com/estuary/connectors/sqlcapture"
"github.com/sirupsen/logrus"
)
// ScanTableChunk fetches a chunk of rows from the specified table, resuming from `resumeKey` if non-nil.
func (db *oracleDatabase) ScanTableChunk(ctx context.Context, info *sqlcapture.DiscoveryInfo, state *sqlcapture.TableState, callback func(event sqlcapture.ChangeEvent) error) (bool, []byte, error) {
logrus.WithField("state", state).Debug("backfill: ScanChunk")
var keyColumns = state.KeyColumns
var resumeAfter = state.Scanned
var schema, table = info.Schema, info.Name
var streamID = sqlcapture.JoinStreamID(schema, table)
var logEntry = logrus.WithField("stream", streamID)
var columnTypes = make(map[string]oracleColumnType)
for name, column := range info.Columns {
columnTypes[name] = column.DataType.(oracleColumnType)
}
// Compute backfill query and arguments list
var query, rowidRangeEnd, lastTableRowID string
var args []any
switch state.Mode {
case sqlcapture.TableStateKeylessBackfill:
if err := db.fetchBackfillRowIDRange(ctx, schema, table); err != nil {
return false, nil, fmt.Errorf("error fetching backfill rowid range: %w", err)
}
lastTableRowID = db.backfillRowIDRanges[streamID][len(db.backfillRowIDRanges[streamID])-1]
var afterRowID = db.backfillRowIDRanges[streamID][0]
if resumeAfter != nil {
afterRowID = string(resumeAfter)
}
logEntry.WithField("rowid", afterRowID).Debug("backfill: scanning keyless table chunk")
query, rowidRangeEnd = db.keylessScanQuery(info, schema, table, afterRowID, db.backfillRowIDRanges[streamID])
case sqlcapture.TableStatePreciseBackfill, sqlcapture.TableStateUnfilteredBackfill:
if resumeAfter != nil {
var resumeKey, err = sqlcapture.UnpackTuple(resumeAfter, decodeKeyFDB)
if err != nil {
return false, nil, fmt.Errorf("error unpacking resume key for %q: %w", streamID, err)
}
if len(resumeKey) != len(keyColumns) {
return false, nil, fmt.Errorf("expected %d resume-key values but got %d", len(keyColumns), len(resumeKey))
}
logEntry.WithFields(logrus.Fields{
"keyColumns": keyColumns,
"resumeKey": resumeKey,
}).Debug("backfill: scanning subsequent table chunk")
query = db.buildScanQuery(false, info, keyColumns, columnTypes, schema, table)
for idx, k := range resumeKey {
args = append(args, sql.Named(fmt.Sprintf("p%d", idx+1), k))
}
} else {
logEntry.WithField("keyColumns", keyColumns).Debug("scanning initial table chunk")
query = db.buildScanQuery(true, info, keyColumns, columnTypes, schema, table)
}
default:
return false, nil, fmt.Errorf("invalid backfill mode %q", state.Mode)
}
// If this is the first chunk being backfilled, run an `EXPLAIN` on it and log the results
db.explainQuery(ctx, streamID, query, args)
// Execute the backfill query to fetch rows from the database
logEntry.WithFields(logrus.Fields{"query": query, "args": args}).Debug("executing query")
rows, err := db.conn.QueryContext(ctx, query, args...)
if err != nil {
return false, nil, fmt.Errorf("unable to execute query %q: %w", query, err)
}
defer rows.Close()
// Process the results into `changeEvent` structs and return them
cols, err := rows.Columns()
if err != nil {
return false, nil, fmt.Errorf("rows.Columns: %w", err)
}
var resultRows int // Count of rows received within the current backfill chunk
var nextRowKey []byte // The row key from which a subsequent backfill chunk should resume
logEntry.Debug("backfill: translating query rows to change events")
var fields = make(map[string]any, len(cols)-1)
var rowid string
var rowOffset = state.BackfilledCount
for rows.Next() {
if rowid, err = scanToMap(rows, cols, fields); err != nil {
return false, nil, err
}
var rowKey []byte
if state.Mode == sqlcapture.TableStateKeylessBackfill {
rowKey = []byte(rowid)
} else {
rowKey, err = sqlcapture.EncodeRowKey(keyColumns, fields, columnTypes, encodeKeyFDB)
if err != nil {
return false, nil, fmt.Errorf("error encoding row key for %q: %w", streamID, err)
}
}
nextRowKey = rowKey
var event = &sqlcapture.OldChangeEvent{
Operation: sqlcapture.InsertOp,
RowKey: rowKey,
Source: &oracleSource{
SourceCommon: sqlcapture.SourceCommon{
Millis: 0, // Not known.
Schema: schema,
Snapshot: true,
Table: table,
},
RowID: rowid,
// Artificial RSID and SSN during backfill
RSID: "0x000000.00000000.0000",
SSN: rowOffset,
Tag: db.config.Advanced.SourceTag,
},
Before: nil,
After: fields,
}
if err := callback(event); err != nil {
return false, nil, fmt.Errorf("error processing change event: %w", err)
}
resultRows++
rowOffset++
}
if err := rows.Err(); err != nil {
return false, nil, err
}
var backfillComplete bool
switch state.Mode {
case sqlcapture.TableStateKeylessBackfill:
backfillComplete = rowidRangeEnd == lastTableRowID
case sqlcapture.TableStatePreciseBackfill, sqlcapture.TableStateUnfilteredBackfill:
backfillComplete = resultRows < db.config.Advanced.BackfillChunkSize
default:
return false, nil, fmt.Errorf("invalid backfill mode %q", state.Mode)
}
// for keyless backfill tables it is possible that we query a rowid range which does not have any rows,
// to avoid getting stuck in a loop nextRowKey has to be set to the end of the range
if rowidRangeEnd != "" {
nextRowKey = []byte(rowidRangeEnd)
}
return backfillComplete, nextRowKey, nil
}
func scanToMap(rows *sql.Rows, cols []string, fields map[string]any) (string, error) {
var fieldsArr = make([]any, len(cols))
var rowid string
for idx, col := range cols {
if col == "ROWID" {
fieldsArr[idx] = &rowid
} else {
fieldsArr[idx] = new(any)
}
}
if err := rows.Scan(fieldsArr...); err != nil {
return "", fmt.Errorf("scanning row: %w", err)
}
for idx, col := range cols {
if col == "ROWID" {
continue
}
fields[col] = *(fieldsArr[idx].(*any))
}
return rowid, nil
}
// WriteWatermark writes the provided string into the 'watermarks' table.
func (db *oracleDatabase) WriteWatermark(ctx context.Context, watermark string) error {
logrus.WithField("watermark", watermark).Debug("writing watermark")
var query = fmt.Sprintf(`MERGE INTO %s USING dual ON (slot=:slot) WHEN MATCHED THEN UPDATE SET watermark=:watermark WHEN NOT MATCHED THEN INSERT (slot, watermark) VALUES (:slot,:watermark)`, db.config.Advanced.WatermarksTable)
var _, err = db.conn.ExecContext(ctx, query, sql.Named("slot", db.config.Advanced.NodeID), sql.Named("watermark", watermark))
if err != nil {
return fmt.Errorf("error upserting new watermark for slot %q: %w", db.config.Advanced.NodeID, err)
}
return nil
}
// WatermarksTable returns the name of the table to which WriteWatermarks writes UUIDs.
func (db *oracleDatabase) WatermarksTable() sqlcapture.StreamID {
var bits = strings.SplitN(db.config.Advanced.WatermarksTable, ".", 2)
return sqlcapture.JoinStreamID(bits[0], bits[1])
}
func (db *oracleDatabase) fetchBackfillRowIDRange(ctx context.Context, schemaName string, tableName string) error {
var streamID = sqlcapture.JoinStreamID(schemaName, tableName)
if _, ok := db.backfillRowIDRanges[streamID]; ok {
return nil
}
// This query starts by reading dba_extents which has information on data blocks of tables
// and splits those blocks into 1g buckets by calculating how many blocks are required to fill
// 1gb based on db_block_size, then dividing up the blocks into buckets using width_bucket,
// calculating the range begin end values necessary to construct rowids and
// finally generating ROWID ranges based on these buckets so we can do backfills 1gb at a time
var query = fmt.Sprintf(`
with extents_data as (
select o.data_object_id, e.file_id, e.block_id, e.blocks
from dba_extents e
join all_objects o
on (e.owner, e.segment_name, e.segment_type) = ((o.owner, o.object_name, o.object_type))
and decode(e.partition_name, o.subobject_name, 0, 1) = 0
where e.segment_type in ('TABLE', 'TABLE PARTITION', 'TABLE SUBPARTITION')
and e.owner = '%s'
and e.segment_name = '%s'
)
, extents_with_sums as (
select sum(blocks) over() total_blocks,
sum(blocks) over(order by data_object_id, file_id, block_id) - blocks cumul_prev_blocks,
sum(blocks) over(order by data_object_id, file_id, block_id) cumul_current_blocks,
greatest(1, FLOOR((sum(blocks) over())/(SELECT (1024*1024*256) / TO_NUMBER(value) FROM v$parameter WHERE name='db_block_size'))) num_buckets,
e.*
from extents_data e
)
, extents_with_buckets as (
select width_bucket(cumul_prev_blocks, 1, total_blocks + 1, num_buckets) prev_bucket,
width_bucket(cumul_prev_blocks+1, 1, total_blocks + 1, num_buckets) first_bucket,
width_bucket(cumul_current_blocks, 1, total_blocks + 1, num_buckets) last_bucket,
e.*
from extents_with_sums e
)
, selected_extents as (
select *
from extents_with_buckets
where cumul_current_blocks = round((last_bucket * total_blocks) / num_buckets)
or prev_bucket < last_bucket
)
, expanded_extents as (
select first_bucket + level - 1 bucket,
case level when 1 then cumul_prev_blocks
else round(((first_bucket + level - 2) * total_blocks) / num_buckets)
end start_blocks,
case first_bucket + level - 1 when last_bucket then cumul_current_blocks - 1
else round(((first_bucket + level - 1) * total_blocks) / num_buckets) - 1
end end_blocks,
e.*
from selected_extents e
connect by cumul_prev_blocks = prior cumul_prev_blocks
and first_bucket + level -1 <= last_bucket
and prior sys_guid() is not null
)
, answer as (
select bucket,
min(data_object_id)
keep (dense_rank first order by cumul_prev_blocks) first_data_object_id,
min(file_id)
keep (dense_rank first order by cumul_prev_blocks) first_file_id,
min(block_id + start_blocks - cumul_prev_blocks)
keep (dense_rank first order by cumul_prev_blocks) first_block_id,
max(end_blocks) + 1 - min(start_blocks) blocks
from expanded_extents
group by bucket
) select
dbms_rowid.rowid_create(
1, first_data_object_id, first_file_id, first_block_id, 0
) rowid_start
from answer
order by bucket
`, schemaName, tableName)
var rows, err = db.conn.QueryContext(ctx, query)
if err != nil {
return fmt.Errorf("querying rowid range: %w", err)
}
defer rows.Close()
db.backfillRowIDRanges[streamID] = make([]string, 0)
for rows.Next() {
var rowidStart string
if err := rows.Scan(&rowidStart); err != nil {
return fmt.Errorf("scanning rowid range: %w", err)
}
db.backfillRowIDRanges[streamID] = append(db.backfillRowIDRanges[streamID], rowidStart)
}
if err := rows.Err(); err != nil {
return fmt.Errorf("iterating rowid ranges: %w", err)
}
var row = db.conn.QueryRowContext(ctx, fmt.Sprintf(`SELECT MAX(ROWID) FROM "%s"."%s"`, schemaName, tableName))
if err != nil {
return fmt.Errorf("querying max ROWID: %w", err)
}
var lastRowID string
if err := row.Scan(&lastRowID); err != nil {
return fmt.Errorf("scanning max ROWID: %w", err)
}
db.backfillRowIDRanges[streamID] = append(db.backfillRowIDRanges[streamID], lastRowID)
if len(db.backfillRowIDRanges[streamID]) < 2 {
return fmt.Errorf("expected at least one rowid range (2 items), instead got %v", db.backfillRowIDRanges[streamID])
}
logrus.WithFields(logrus.Fields{
"ranges": fmt.Sprintf("%v", db.backfillRowIDRanges[streamID]),
"streamID": streamID,
}).Debug("backfill: rowid ranges")
return nil
}
// The set of column types for which we need to specify `COLLATE BINARY` to get
// proper ordering and comparison. Represented as a map[string]bool so that it can be
// combined with the "is the column typename a string" check into one if statement.
// See https://docs.oracle.com/en/database/oracle/oracle-database/19/sqlrf/COLLATE-Operator.html
var columnBinaryKeyComparison = map[string]bool{
"varchar2": true,
"char": true,
"nvarchar": true,
"nchar": true,
}
// render a "cast" expression for a column so that we can cast it to the
// type and format we expect for that column (e.g. for timestamps we expect a certain format with UTC timezone, etc.)
func castColumn(col sqlcapture.ColumnInfo) string {
var dataType = col.DataType.(oracleColumnType).Original
var isDateTime = dataType == "DATE" || strings.HasPrefix(dataType, "TIMESTAMP")
var isInterval = dataType == "INTERVAL"
if !isDateTime && !isInterval {
return quoteColumnName(col.Name)
}
if isInterval {
return fmt.Sprintf("TO_CHAR(%s) AS %s", quoteColumnName(col.Name), quoteColumnName(col.Name))
}
var dataScale int
if index := strings.Index(dataType, "("); index > -1 {
var endIndex = strings.Index(dataType, ")")
var err error
dataScale, err = strconv.Atoi(dataType[index+1 : endIndex])
if err != nil {
panic(err)
}
}
var out = fmt.Sprintf("TO_CHAR(%s", quoteColumnName(col.Name))
var format string
if strings.Contains(dataType, "TIME ZONE") && !strings.Contains(dataType, "LOCAL TIME ZONE") {
format = `'YYYY-MM-DD"T"HH24:MI:SS.FF"Z"'`
} else if dataScale > 0 {
format = `'YYYY-MM-DD"T"HH24:MI:SS.FF'`
} else {
format = `'YYYY-MM-DD"T"HH24:MI:SS'`
}
if strings.Contains(dataType, "TIME ZONE") {
out = out + " AT TIME ZONE 'UTC'"
}
out = out + fmt.Sprintf(", %s) AS %s", format, quoteColumnName(col.Name))
return out
}
func base64cmp(a, b string) int {
decodedA, err := base64.RawStdEncoding.DecodeString(a)
if err != nil {
panic(err)
}
decodedB, err := base64.RawStdEncoding.DecodeString(b)
if err != nil {
panic(err)
}
return bytes.Compare(decodedA, decodedB)
}
// Keyless scan uses ROWID to order the rows. Note that this only ensures eventual consistency
// since ROWIDs are not always increasing (new rows can use smaller ROWIDs if space is available in an earlier block)
// but since we will capture changes since the start of the backfill using SCN tracking, we will eventually be consistent
func (db *oracleDatabase) keylessScanQuery(info *sqlcapture.DiscoveryInfo, schemaName, tableName, afterRowID string, rowidRanges []string) (string, string) {
var query = new(strings.Builder)
var columnSelect []string
for _, col := range info.Columns {
columnSelect = append(columnSelect, castColumn(col))
}
var idx = slices.Index(rowidRanges, afterRowID)
// It is possible for rowidRanges to change across restarts, and thus afterRowID will not match
// the same ranges. In this case we re-backfill the last range
if idx == -1 {
var nextIdx = slices.IndexFunc(rowidRanges, func(rowid string) bool {
return afterRowID == rowid || base64cmp(afterRowID, rowid) < 0
})
if nextIdx == -1 {
panic(fmt.Sprintf("expected to find ROWID range for %s in %v", afterRowID, rowidRanges))
}
idx = nextIdx - 1
if idx < 0 {
idx = 0
}
}
if idx == len(rowidRanges)-1 {
panic(fmt.Sprintf("unexpected keylessScanQuery with last ROWID as afterRowID: %s, %v", afterRowID, rowidRanges))
}
var rowidStart = rowidRanges[idx]
var rowidEnd = rowidRanges[idx+1]
// It is faster to first find the smallest and the largest ROWIDs of the range we want to cover and then query
// all of the data in that range, instead of ordering all rows based on ROWID and then filtering the ROWID
fmt.Fprintf(query, `SELECT ROWID, %s FROM "%s"."%s"`, strings.Join(columnSelect, ","), schemaName, tableName)
fmt.Fprintf(query, ` WHERE ROWID >= '%s'`, rowidStart)
fmt.Fprintf(query, ` AND ROWID <= '%s'`, rowidEnd)
return query.String(), rowidEnd
}
func (db *oracleDatabase) buildScanQuery(start bool, info *sqlcapture.DiscoveryInfo, keyColumns []string, columnTypes map[string]oracleColumnType, schemaName, tableName string) string {
// Construct lists of key specifiers and placeholders. They will be joined with commas and used in the query itself.
var pkey []string
var args []string
for idx, colName := range keyColumns {
var quotedName = quoteColumnName(colName)
// If a precise backfill is requested *and* the column type requires binary ordering for precise
// backfill comparisons to work, add the 'COLLATE BINARY' qualifier to the column name.
if columnTypes[colName].JsonType == "string" && columnBinaryKeyComparison[colName] {
pkey = append(pkey, quotedName+" COLLATE BINARY")
} else {
pkey = append(pkey, quotedName)
}
args = append(args, fmt.Sprintf(":p%d", idx+1))
}
// Construct the query itself
var query = new(strings.Builder)
var columnSelect []string
for _, col := range info.Columns {
columnSelect = append(columnSelect, castColumn(col))
}
fmt.Fprintf(query, `SELECT ROWID, %s FROM "%s"."%s"`, strings.Join(columnSelect, ","), schemaName, tableName)
if !start {
for i := 0; i != len(pkey); i++ {
if i == 0 {
fmt.Fprintf(query, " WHERE (")
} else {
fmt.Fprintf(query, ") OR (")
}
for j := 0; j != i; j++ {
fmt.Fprintf(query, "%s = %s AND ", pkey[j], args[j])
}
fmt.Fprintf(query, "%s > %s", pkey[i], args[i])
}
fmt.Fprintf(query, ")")
}
fmt.Fprintf(query, " ORDER BY %s ASC", strings.Join(pkey, ", "))
fmt.Fprintf(query, ` FETCH NEXT %d ROWS ONLY`, db.config.Advanced.BackfillChunkSize)
return query.String()
}
func (db *oracleDatabase) explainQuery(ctx context.Context, streamID sqlcapture.StreamID, query string, args []interface{}) {
// Only EXPLAIN the backfill query once per connector invocation
if db.explained == nil {
db.explained = make(map[sqlcapture.StreamID]struct{})
}
if _, ok := db.explained[streamID]; ok {
return
}
db.explained[streamID] = struct{}{}
// Ask the database to EXPLAIN the backfill query
var explainQuery = "EXPLAIN PLAN FOR " + query
logrus.WithFields(logrus.Fields{
"id": streamID,
"query": explainQuery,
}).Info("explain backfill query")
_, err := db.conn.ExecContext(ctx, explainQuery, args...)
if err != nil {
logrus.WithFields(logrus.Fields{"id": streamID, "err": err}).Error("unable to explain query")
return
}
rows, err := db.conn.QueryContext(ctx, "SELECT PLAN_TABLE_OUTPUT FROM table(dbms_xplan.display)")
if err != nil {
logrus.WithFields(logrus.Fields{"id": streamID, "err": err}).Error("unable to explain query")
return
}
defer rows.Close()
var outputLines []string
for rows.Next() {
var outputLine string
if err := rows.Scan(&outputLine); err != nil {
logrus.WithFields(logrus.Fields{
"id": streamID,
"err": err,
}).Error("error getting row value")
return
}
outputLines = append(outputLines, outputLine)
}
if err := rows.Err(); err != nil {
logrus.WithFields(logrus.Fields{"id": streamID, "err": err}).Error("error iterating explain output")
return
}
logrus.WithFields(logrus.Fields{
"streamID": streamID,
"output": strings.Join(outputLines, "\n"),
}).Info("explain backfill query")
}
func (db *oracleDatabase) EstimatedRowCounts(ctx context.Context, tables []sqlcapture.TableID) (map[sqlcapture.TableID]int, error) {
var result = make(map[sqlcapture.TableID]int)
for _, table := range tables {
result[table] = 0
}
return result, nil
}