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biddiscobiddisco
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Add santis recipe and build script
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‎recipes/paraview/gh200/cache-config.yaml

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root: $SCRATCH/uenv-cache
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key: $SCRATCH/.keys/.gpg-spack-paraview

‎recipes/paraview/gh200/compilers.yaml

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bootstrap:
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spec: [email protected]
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gcc:
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specs:
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- [email protected]

‎recipes/paraview/gh200/config.yaml

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name: prgenv-gnu
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spack:
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commit: h5hut
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repo: /bret/scratch/cscs/biddisco/spack-santis
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store: /user-environment
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description: ParaView + assorted other tools
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‎recipes/paraview/gh200/environments.yaml

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gcc-env:
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compiler:
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- toolchain: gcc
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spec: gcc
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mpi:
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spec: [email protected]
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gpu: cuda
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unify: true
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specs:
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- cmake
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- ninja
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- direnv
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- fftw
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- fmt
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- stdexec
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- boost +atomic +chrono +container +context +coroutine +date_time +filesystem +graph +json +mpi +multithreaded +program_options +regex +serialization +shared +system +test +thread
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- hdf5 +mpi
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- h5hut
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- ninja
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- openblas threads=openmp
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- blaspp
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- lapackpp
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- [email protected]
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- [email protected]
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- [email protected]
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- py-pandas
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- py-matplotlib
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- tbb
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- libtheora@master
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# - ospray
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# We turn off hdf5 because vtk::hdf5 needs the internal hdf5 not the external one
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- [email protected] +cuda +mpi ~hdf5 +opengl2 +tbb +raytracing +python use_vtkm=on +development_files build_edition=rendering
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variants:
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- +mpi
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- +cuda
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- cuda_arch=90
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- ~fortran
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- build_type=Release
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- cxxstd=20
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- ~examples
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views:
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default:
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link: roots

‎recipes/paraview/gh200/extra/reframe.yaml

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default:
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features:
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- cuda
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- mpi
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- osu-micro-benchmarks
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- openmp
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- serial
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cc: mpicc
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cxx: mpic++
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ftn: mpifort
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activation: /user-environment/env/default/activate.sh

‎recipes/paraview/gh200/modules.yaml

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modules:
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# Paths to check when creating modules for all module sets
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prefix_inspections:
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bin:
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- PATH
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lib:
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- LD_LIBRARY_PATH
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lib64:
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- LD_LIBRARY_PATH
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default:
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arch_folder: false
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# Where to install modules
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roots:
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tcl: /user-environment/modules
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tcl:
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all:
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autoload: none
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hash_length: 0
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exclude_implicits: true
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exclude: ['%[email protected]', 'gcc %[email protected]']
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projections:
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all: '{name}/{version}'

‎recipes/paraview/scripts/job-build-santis.sh

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#!/bin/bash
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#SBATCH --job-name=stackinator-paraview
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#SBATCH --time=04:00:00
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#SBATCH --nodes=1
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#SBATCH --partition=normal
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#SBATCH --account=csstaff
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#SBATCH --output=/users/biddisco/stackinator-output.txt
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#SBATCH --error=/users/biddisco/stackinator-error.txt
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export PYTHONUNBUFFERED=1
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SRC=/users/biddisco/src
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CLUSTER=santis
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STACKI_DIR=$SRC/alps-vcluster/stackinator
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RECIPE_DIR=$SRC/alps-vcluster/alps-spack-stacks/recipes/paraview/gh200
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SYSTEM_DIR=$SRC/alps-vcluster/alps-cluster-config/$CLUSTER
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BUILD_DIR=/dev/shm/biddisco
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echo "# -----------------------------------------"
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echo "Setup/clean build dir"
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#rm -rf ${BUILD_DIR}/*
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mkdir -p ${BUILD_DIR}
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mkdir -p ${BUILD_DIR}/tmp
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echo "# -----------------------------------------"
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echo "Execute stackinator"
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$STACKI_DIR/bin/stack-config -s $SYSTEM_DIR -b ${BUILD_DIR} -r $RECIPE_DIR -c $RECIPE_DIR/cache-config.yaml --debug --develop
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# if using develop branch of spack, add --develop
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#$STACKI_DIR/bin/stack-config -s $SYSTEM_DIR -b ${BUILD_DIR} -r $RECIPE_DIR -c $RECIPE_DIR/cache-config.yaml --debug --develop
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# build the squashfs image - bubblewrap is used inside the makefile
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echo "# -----------------------------------------"
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echo "Trigger build"
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cd /dev/shm/biddisco
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env --ignore-environment PATH=/usr/bin:/bin:`pwd`/spack/bin HOME=$HOME https_proxy=$https_proxy http_proxy=$http_proxy no_proxy="$no_proxy" make store.squashfs -j32
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echo "# -----------------------------------------"
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echo "Copy generated squashfs file"
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DATE=$(date +%F)
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cp /dev/shm/biddisco/store.squashfs $SCRATCH/$CLUSTER-paraview-$DATE.squashfs
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# -----------------------------------------
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# debug : create a shell using the spack setup used to create the squashfs
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# -----------------------------------------
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# $BUILD_DIR/bwrap-mutable-root.sh --tmpfs ~ --bind $BUILD_DIR/tmp /tmp --bind $BUILD_DIR/store /user-environment env --ignore-environment PATH=/usr/bin:/bin:`pwd`/spack/bin SPACK_SYSTEM_CONFIG_PATH=/user-environment/config /bin/bash --norc --noprofile
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