Modernize website and automate Pages deployment (#114) #22
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| name: CI | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11" | |
| - run: pip install flake8 | |
| - name: Run flake8 | |
| run: flake8 vizseq tests | |
| security: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11" | |
| - name: Upgrade build tooling | |
| run: pip install --upgrade "setuptools>=83" | |
| - run: pip install -e . bandit pip-audit | |
| - name: Run bandit security scan | |
| run: bandit -r vizseq -ll -ii | |
| - name: Audit dependencies for known vulnerabilities | |
| run: pip-audit | |
| test: | |
| needs: lint | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install libsndfile (Linux) | |
| if: runner.os == 'Linux' | |
| run: sudo apt-get update && sudo apt-get install -y libsndfile1 | |
| - name: Install libsndfile (macOS) | |
| if: runner.os == 'macOS' | |
| run: brew install libsndfile | |
| - name: Install VizSeq | |
| run: pip install -e . | |
| - name: Download example data | |
| run: bash get_example_data.sh | |
| - run: python -m tests.test_n_gram_based_scorers | |
| - run: python -m tests.test_ipynb | |
| embeddings: | |
| needs: lint | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Install VizSeq with embedding dependencies | |
| run: pip install -e .[embeddings] | |
| - name: Download example data | |
| run: bash get_example_data.sh | |
| - run: python -m tests.test_embedding_based_scorers | |
| coverage: | |
| needs: lint | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| # torch<2.0 (via [all] -> embeddings) ships no cp311 wheel | |
| python-version: "3.10" | |
| - run: sudo apt-get update && sudo apt-get install -y libsndfile1 | |
| - name: Install VizSeq | |
| run: pip install -e .[all] pytest pytest-cov | |
| - name: Download example data | |
| run: bash get_example_data.sh | |
| - name: Run tests with coverage | |
| run: pytest tests/ --cov=vizseq --cov-report=xml --cov-report=term-missing | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: coverage-report | |
| path: coverage.xml |