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Trawling 4 PACE

Mapping fishing zones using PACE optical data

Collaborators

Name Github username
Mary Kate Munley MMunley2
Justine Whitaker jwhitaker-cgl
Punya Puthukulangara punyaravichandran
Victoria Abunaw opisthoproctus
Haley Synan hsynan
Leandro Machado leandrometeoro
Frederic Bonou FREDERICBONOU

Research question

  • Can we predict silver hake abundance using optical data?
  • How do performance of different models compare (random forest and boosted regression tree)

Datasets

  • NOAA NEFSC Bottom Trawl Survey Catch data from Spring 2024, Fall 2024, Spring 2025
  • PACE Rrs
  • AVISO Finite Size Lyapunov Exponent (FSLE)
  • Copernicus sea surface wind and stress

Planning

Initial idea:

Folder Structure

  • contributor_folders (optional) Each contributor can make a folder here and push their work here during the week. This will allow everyone to see each others work but prevent any merge conflicts.
  • final_notebooks When the team develops shared final notebooks, they can be shared here. Make sure to communicate so that you limit merge conflicts.
  • scripts Shared scripts or functions can be added here.
  • data Shared dataset can be shared here. Note, do not put large datasets on GitHub. Speak to the organizers if you need to share large datasets.