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README.md

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[![Docker Pulls](https://img.shields.io/docker/pulls/flywheel/hcp-struct.svg)](https://hub.docker.com/r/flywheel/hcp-struct/)
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[![Docker Stars](https://img.shields.io/docker/stars/flywheel/hcp-struct.svg)](https://hub.docker.com/r/flywheel/hcp-struct/)
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# flywheel/hcp-struct
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[Flywheel Gear](https://github.com/flywheel-io/gears/tree/master/spec) that runs the structural preprocessing steps of the [Human Connectome Project](http://www.humanconnectome.org) Minimal Preprocessing Pipeline (MPP) described in [Glasser et al. 2013](http://www.ncbi.nlm.nih.gov/pubmed/23668970). Currently, this includes v4.0-alpha release of PreFreeSurfer, FreeSurfer, and PostFreeSurfer pipelines, as well as generating some helpful QC images. For more info on the pipelines, see [HCP Pipelines](https://github.com/Washington-University/Pipelines).
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