first commit

Author: karthikcharan83

.gitignore

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+*.py[cod]
+
+# C extensions
+*.so
+
+# Packages
+*.egg
+*.egg-info
+dist
+build
+eggs
+parts
+bin
+var
+sdist
+develop-eggs
+.installed.cfg
+lib
+lib64
+
+# Installer logs
+pip-log.txt
+
+# Unit test / coverage reports
+.coverage
+.tox
+nosetests.xml
+
+# Translations
+*.mo
+
+# Mr Developer
+.mr.developer.cfg
+.project
+.pydevproject
+
+# Complexity
+output/*.html
+output/*/index.html
+
+# Sphinx
+docs/_build

.travis.yml

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+# Config file for automatic testing at travis-ci.org
+
+language: python
+
+python:
+  - "3.3"
+  - "2.7"
+  - "2.6"
+  - "pypy"
+
+# command to install dependencies, e.g. pip install -r requirements.txt --use-mirrors
+install: 
+  - pip install -r requirements.txt
+
+# command to run tests, e.g. python setup.py test
+script:
+  - py.test

AUTHORS.rst

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+=======
+Credits
+=======
+
+Development Lead
+----------------
+
+* Karthik Konduri <[email protected]>
+
+Contributors
+------------
+
+None yet. Why not be the first?

CONTRIBUTING.rst

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+============
+Contributing
+============
+
+Contributions are welcome, and they are greatly appreciated! Every
+little bit helps, and credit will always be given. 
+
+You can contribute in many ways:
+
+Types of Contributions
+----------------------
+
+Report Bugs
+~~~~~~~~~~~
+
+Report bugs at https://github.com/karthikcharan83/popgen/issues.
+
+If you are reporting a bug, please include:
+
+* Your operating system name and version.
+* Any details about your local setup that might be helpful in troubleshooting.
+* Detailed steps to reproduce the bug.
+
+Fix Bugs
+~~~~~~~~
+
+Look through the GitHub issues for bugs. Anything tagged with "bug"
+is open to whoever wants to implement it.
+
+Implement Features
+~~~~~~~~~~~~~~~~~~
+
+Look through the GitHub issues for features. Anything tagged with "feature"
+is open to whoever wants to implement it.
+
+Write Documentation
+~~~~~~~~~~~~~~~~~~~
+
+Synthetic Population Generator .20 could always use more documentation, whether as part of the 
+official Synthetic Population Generator .20 docs, in docstrings, or even on the web in blog posts,
+articles, and such.
+
+Submit Feedback
+~~~~~~~~~~~~~~~
+
+The best way to send feedback is to file an issue at https://github.com/karthikcharan83/popgen/issues.
+
+If you are proposing a feature:
+
+* Explain in detail how it would work.
+* Keep the scope as narrow as possible, to make it easier to implement.
+* Remember that this is a volunteer-driven project, and that contributions
+  are welcome :)
+
+Get Started!
+------------
+
+Ready to contribute? Here's how to set up `popgen` for
+local development.
+
+1. Fork_ the `popgen` repo on GitHub.
+2. Clone your fork locally::
+
+    $ git clone [email protected]:your_name_here/popgen.git
+
+3. Create a branch for local development::
+
+    $ git checkout -b name-of-your-bugfix-or-feature
+
+Now you can make your changes locally.
+
+4. When you're done making changes, check that your changes pass style and unit
+   tests, including testing other Python versions with tox::
+
+    $ tox
+
+To get tox, just pip install it.
+
+5. Commit your changes and push your branch to GitHub::
+
+    $ git add .
+    $ git commit -m "Your detailed description of your changes."
+    $ git push origin name-of-your-bugfix-or-feature
+
+6. Submit a pull request through the GitHub website.
+
+.. _Fork: https://github.com/Nekroze/popgen/fork
+
+Pull Request Guidelines
+-----------------------
+
+Before you submit a pull request, check that it meets these guidelines:
+
+1. The pull request should include tests.
+2. If the pull request adds functionality, the docs should be updated. Put
+   your new functionality into a function with a docstring, and add the
+   feature to the list in README.rst.
+3. The pull request should work for Python 2.6, 2.7, and 3.3, and for PyPy.
+   Check https://travis-ci.org/karthikcharan83/popgen 
+   under pull requests for active pull requests or run the ``tox`` command and
+   make sure that the tests pass for all supported Python versions.
+
+
+Tips
+----
+
+To run a subset of tests::
+
+	 $ py.test test/test_popgen.py

HISTORY.rst

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+.. :changelog:
+
+History
+-------
+
+2.0 (2014-12-12)
+++++++++++++++++++
+
+* First release on PyPI.

LICENSE

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+The MIT License (MIT)
+
+Copyright (c) 2014 Karthik Konduri
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of
+this software and associated documentation files (the "Software"), to deal in
+the Software without restriction, including without limitation the rights to
+use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of
+the Software, and to permit persons to whom the Software is furnished to do so,
+subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS
+FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR
+COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER
+IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

MANIFEST.in

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+include AUTHORS.rst
+include CONTRIBUTING.rst
+include HISTORY.rst
+include LICENSE
+include README.rst

Makefile

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+.PHONY: help clean clean-pyc clean-build list test test-all coverage docs release sdist
+
+help:
+	@echo "clean-build - remove build artifacts"
+	@echo "clean-pyc - remove Python file artifacts"
+	@echo "lint - check style with flake8"
+	@echo "test - run tests quickly with the default Python"
+	@echo "testall - run tests on every Python version with tox"
+	@echo "coverage - check code coverage quickly with the default Python"
+	@echo "docs - generate Sphinx HTML documentation, including API docs"
+	@echo "release - package and upload a release"
+	@echo "sdist - package"
+
+clean: clean-build clean-pyc
+
+clean-build:
+	rm -fr build/
+	rm -fr dist/
+	rm -fr *.egg-info
+
+clean-pyc:
+	find . -name '*.pyc' -exec rm -f {} +
+	find . -name '*.pyo' -exec rm -f {} +
+	find . -name '*~' -exec rm -f {} +
+
+lint:
+	flake8 popgen test
+
+test:
+	py.test
+
+test-all:
+	tox
+
+coverage:
+	coverage run --source popgen setup.py test
+	coverage report -m
+	coverage html
+	open htmlcov/index.html
+
+docs:
+	rm -f docs/popgen.rst
+	rm -f docs/modules.rst
+	sphinx-apidoc -o docs/ popgen
+	$(MAKE) -C docs clean
+	$(MAKE) -C docs html
+	open docs/_build/html/index.html
+
+release: clean
+	python setup.py sdist upload
+	python setup.py bdist_wheel upload
+
+sdist: clean
+	python setup.py sdist
+	python setup.py bdist_wheel upload
+	ls -l dist

README.rst

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+=============================
+Synthetic Population Generator .20
+=============================
+
+.. image:: https://badge.fury.io/py/popgen.png
+    :target: http://badge.fury.io/py/popgen
+
+.. image:: https://travis-ci.org/karthikcharan83/popgen.png?branch=master
+    :target: https://travis-ci.org/karthikcharan83/popgen
+
+.. image:: https://pypip.in/d/popgen/badge.png
+    :target: https://pypi.python.org/pypi/popgen
+
+
+Synthetic Population Generator 2.0
+
+
+Features
+--------
+
+* TODO