Ruff Rules and Some Maintenance (#114)

Author: fsoubelet

.git-blame-ignore-revs

@@ -0,0 +1,8 @@
+# Run this command to always ignore formatting commits in `git blame`
+# git config blame.ignoreRevsFile .git-blame-ignore-revs
+
+# Ruff rules refactoring, part 1
+# insert_commit_sha_and_uncomment
+
+# Ruff rules refactoring, part 1
+# insert_commit_sha_and_uncomment

.github/workflows/coverage.yml

@@ -18,7 +18,7 @@ jobs:
         python-version: "3.13"
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
 
       - name: Install uv and Python ${{ env.python-version }}
         uses: astral-sh/setup-uv@v6
@@ -38,6 +38,6 @@ jobs:
         run: make tests
 
       - name: Upload Coverage to Codecov
-        uses: codecov/codecov-action@v4
+        uses: codecov/codecov-action@v5
         with:
           token: ${{ secrets.CODECOV_TOKEN }}

.github/workflows/cron.yml

@@ -21,7 +21,7 @@ jobs:
       fail-fast: false
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
 
       - name: Install uv and Python ${{ matrix.python-version }}
         uses: astral-sh/setup-uv@v6

.github/workflows/docker.yml

@@ -17,8 +17,8 @@ jobs:
     runs-on: ubuntu-latest
     steps:
 
-      - name: Check Out Repo 
-        uses: actions/checkout@v4
+      - name: Check Out Repo
+        uses: actions/checkout@v5
 
       - name: Set up QEMU
         uses: docker/setup-qemu-action@v3

.github/workflows/documentation.yml

@@ -18,7 +18,7 @@ jobs:
         python-version: "3.13"
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
 
       - name: Update apt
         run: sudo apt-get update

.github/workflows/publish.yml

@@ -17,7 +17,7 @@ jobs:
 
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
 
       - name: Install uv and Python ${{ env.python-version }}
         uses: astral-sh/setup-uv@v6

.github/workflows/tests.yml

@@ -21,7 +21,7 @@ jobs:
       fail-fast: false
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
 
       - name: Install uv and Python ${{ matrix.python-version }}
         uses: astral-sh/setup-uv@v6

docs/conf.py

@@ -42,7 +42,7 @@
 # -- Project information -----------------------------------------------------
 
 project = "PyhDToolkit"
-copyright = f"2019, {pyhdtoolkit.__author__}"
+copyright_ = f"2019, {pyhdtoolkit.__author__}"
 author = pyhdtoolkit.__author__
 
 rst_prolog = f""":github_url: {pyhdtoolkit.__url__}"""
@@ -175,7 +175,7 @@
     "capture_repr": ("_repr_html_",),
     "compress_images": ("images", "thumbnails", "-o1"),
     "only_warn_on_example_error": True,  # keep the build going if an example fails, important for doc workflow
-    "parallel": -1,  # number of jobs to use to build the gallery
+    "parallel": 1,  # number of jobs to use to build the gallery
     "write_computation_times": False,  # do not write time to run example in the output
 }
 

examples/demo_acd_tracking_spectra.py

@@ -34,7 +34,6 @@
 import matplotlib.pyplot as plt
 import numpy as np
 import pandas as pd
-
 from cpymad.madx import Madx
 
 from pyhdtoolkit.cpymadtools import lhc, matching, track

examples/demo_aperture.py

@@ -23,7 +23,6 @@
 """
 
 import matplotlib.pyplot as plt
-
 from cpymad.madx import Madx
 
 from pyhdtoolkit.cpymadtools import lhc