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feature: support IUPAC bases
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8 files changed

+1119
-340
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8 files changed

+1119
-340
lines changed

Cargo.lock

+81-36
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Cargo.toml

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@@ -6,7 +6,7 @@ authors = [
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]
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name = "fqtk"
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version = "0.3.2-rc.1"
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edition = "2021"
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edition = "2024"
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license = "MIT"
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readme = "README.md"
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homepage = "https://github.com/fulcrumgenomics/fqtk"
@@ -30,7 +30,7 @@ path = "src/bin/main.rs"
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# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
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[dependencies]
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ahash = "0.8.2"
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ahash = "0.8.11"
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anyhow = "1.0.38"
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bstr = "1.0.1"
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clap = { version = "4.0.25", features = ["derive"] }
@@ -49,6 +49,7 @@ serde-aux = "4.1.2"
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seq_io = "0.3.1"
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thiserror = "1.0.37"
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proglog = {version = "0.3.0", features = ["pretty_counts"] }
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lazy_static = "1.5.0"
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[dev-dependencies]
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csv = "1.1.6"

rust-toolchain.toml

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@@ -1,3 +1,3 @@
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[toolchain]
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channel = "1.65.0"
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channel = "nightly"
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components = ["rustfmt", "clippy"]

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