diff --git a/drop/modules/aberrant-expression-pipeline/OUTRIDER/Summary.R b/drop/modules/aberrant-expression-pipeline/OUTRIDER/Summary.R index 378faa1b..1dea0cc9 100644 --- a/drop/modules/aberrant-expression-pipeline/OUTRIDER/Summary.R +++ b/drop/modules/aberrant-expression-pipeline/OUTRIDER/Summary.R @@ -49,7 +49,7 @@ if(is.null(colData(ods)$isExternal)) colData(ods)$isExternal <- FALSE #' #' ## Visualize #' ### Encoding dimension -if isTRUE((metadata(ods)[["useOHTtoObtainQ"]])){ +if (isTRUE(metadata(ods)[["useOHTtoObtainQ"]])){ print(c("Optimal dimension q was determined using OHT to be", getBestQ(ods)), quote = F) } else{ plotEncDimSearch(ods) +