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content/news/2026/2026-07-20-gcc2026-cofest-outcomes/index.md

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@@ -8,6 +8,7 @@ contributions:
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tags: [conference, community, gcc, cofest]
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subsites: [global]
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main_subsite: global
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autotoc: false
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components: true
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---
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<div style="display: grid; grid-template-columns: repeat(auto-fit, minmax(260px, 1fr)); gap: 1rem; margin-top: 0.75rem;">
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<img src="/images/events/gcc2026/cofest/driving_galaxy_with_agents.jpg" alt="CoFest participants working on the Driving Galaxy with Agents project." style="width: 100%; height: 220px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/driving_galaxy_with_agents_2.jpg" alt="CoFest participants collaborating on agentic Galaxy interactions." style="width: 100%; height: 220px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/driving_galaxy_with_agents.jpg" alt="CoFest participants working on the Driving Galaxy with Agents project." style="width: 100%; height: 260px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/driving_galaxy_with_agents_2.jpg" alt="CoFest participants collaborating on agentic Galaxy interactions." style="width: 100%; height: 260px; object-fit: cover; object-position: top; border-radius: 10px;" />
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</CofestProject>
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<img src="/images/events/gcc2026/cofest/codex.jpg" alt="CoFest participants working on the Galaxy CoDex project." style="width: 100%; height: 220px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/codex_2.jpg" alt="Galaxy CoDex team collaborating during CoFest." style="width: 100%; height: 220px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/codex.jpg" alt="CoFest participants working on the Galaxy CoDex project." style="width: 100%; height: 260px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/codex_2.jpg" alt="Galaxy CoDex team collaborating during CoFest." style="width: 100%; height: 260px; object-fit: cover; object-position: top; border-radius: 10px;" />
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</CofestProject>
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<div style="display: grid; grid-template-columns: repeat(auto-fit, minmax(260px, 1fr)); gap: 1rem; margin-top: 0.75rem;">
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<img src="/images/events/gcc2026/cofest/gtn_admin_training.jpg" alt="CoFest participants working on GTN admin training." style="width: 100%; height: 220px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/gtn_admin_training_2.jpg" alt="GTN admin training and TPV debugging session during CoFest." style="width: 100%; height: 220px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/gtn_admin_training.jpg" alt="CoFest participants working on GTN admin training." style="width: 100%; height: 260px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/gtn_admin_training_2.jpg" alt="GTN admin training and TPV debugging session during CoFest." style="width: 100%; height: 260px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<CofestProject name="Arts & humanities tools in Galaxy" description="Improving support for arts and humanities tools in Galaxy." lead="Eamonn Bell" assignees="Johannes Nussbaum, Aysam Guerler" />
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<CofestProject name="AI agent to auto-wrap Bioconda/Bioconductor tools" description="A persistent AI agent set up to auto-wrap any new tools added to Bioconda/Bioconductor or similar repos." lead="Enis Afgan" assignees="Daniel Golparian">
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<div style="margin-top: 0.75rem;">
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<img src="/images/events/gcc2026/cofest/ai_agent_to_wrap.jpg" alt="CoFest participants working on the AI agent to auto-wrap Bioconda/Bioconductor tools project." style="width: 100%; height: 220px; object-fit: cover; object-position: top; border-radius: 10px;" />
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</div>
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</CofestProject>
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<CofestProject name="AI agent to auto-wrap Bioconda/Bioconductor tools" description="A persistent AI agent set up to auto-wrap any new tools added to Bioconda/Bioconductor or similar repos." lead="Enis Afgan" assignees="Daniel Golparian" />
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<CofestProject name="Modernizing Pulsar DRMAA manager" description="Modernize the Pulsar DRMAA job manager." lead="Matthias Bernt" assignees="Anthony Bretaudeau, Reid Wagner, Nicola Soranzo">
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<img src="/images/events/gcc2026/cofest/modernizing_pulsar.jpg" alt="CoFest participants working on modernizing the Pulsar DRMAA manager." style="width: 100%; height: 220px; object-fit: cover; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/modernizing_pulsar.jpg" alt="CoFest participants working on modernizing the Pulsar DRMAA manager." style="width: 100%; height: 260px; object-fit: cover; border-radius: 10px;" />
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<CofestProject name="Time-based quotas & pgcleanup emails" description="Two related backend papercuts: (a) quotas with a start/end date that auto-lift after the end date — useful for workshops; (b) pgcleanup emails to users prior to dataset deletion." lead="Charles Coulombe" assignees="John Davis, Boris Depoortere, Gareth Price, Nate Coraor">
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<img src="/images/events/gcc2026/cofest/time_based_quotas.jpg" alt="CoFest participants working on time-based quotas and pgcleanup emails." style="width: 100%; height: 220px; object-fit: cover; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/time_based_quotas.jpg" alt="CoFest participants working on time-based quotas and pgcleanup emails." style="width: 100%; height: 260px; object-fit: cover; border-radius: 10px;" />
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<CofestProject name="Tool wrapping & QC subworkflow for public health pathogen genomics" description="Wrap and extend bactscout towards a QC subworkflow for public health pathogen genomics." lead="Peter van Heusden" assignees="Kobika Thillainathan, Povilas Matusevicius, Buhle Ntozini">
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<img src="/images/events/gcc2026/cofest/tool_wrapping.jpg" alt="CoFest participants working on tool wrapping for public health pathogen genomics." style="width: 100%; height: 220px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/tool_wrapping.jpg" alt="CoFest participants working on tool wrapping for public health pathogen genomics." style="width: 100%; height: 260px; object-fit: cover; object-position: top; border-radius: 10px;" />
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<CofestProject name="Galaxy Ecology tools and tutorials development" lead="Yvan Le Bras" assignees="Samuel le Goff, Joe Ueda, Pauline Seguineau, Barreau Arthur, Kevin Payet">
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<img src="/images/events/gcc2026/cofest/ecology_tools.jpg" alt="CoFest participants working on Galaxy Ecology tools and tutorials." style="width: 100%; height: 220px; object-fit: cover; border-radius: 10px;" />
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<img src="/images/events/gcc2026/cofest/ecology_tools.jpg" alt="CoFest participants working on Galaxy Ecology tools and tutorials." style="width: 100%; height: 260px; object-fit: cover; border-radius: 10px;" />
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