[RFC] Unify object store and file sources on a shared transport #28136
Workflow file for this run
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| name: CWL conformance | |
| on: | |
| push: | |
| paths-ignore: | |
| - 'client/**' | |
| - 'doc/**' | |
| - 'lib/galaxy_test/selenium/**' | |
| - 'packages/**' | |
| pull_request: | |
| paths-ignore: | |
| - 'client/**' | |
| - 'doc/**' | |
| - 'lib/galaxy_test/selenium/**' | |
| - 'packages/**' | |
| env: | |
| GALAXY_TEST_DBURI: 'postgresql+psycopg://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: {} | |
| jobs: | |
| test: | |
| name: Test | |
| if: false | |
| runs-on: ubuntu-latest | |
| continue-on-error: ${{ startsWith(matrix.marker, 'red') }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.10'] | |
| marker: ['green', 'red and required', 'red and not required'] | |
| conformance-version: ['cwl_conformance_v1_0'] #, 'cwl_conformance_v1_1', 'cwl_conformance_v1_2'] | |
| services: | |
| postgres: | |
| image: postgres:18 | |
| env: | |
| POSTGRES_USER: postgres | |
| POSTGRES_PASSWORD: postgres | |
| POSTGRES_DB: postgres | |
| ports: | |
| - 5432:5432 | |
| steps: | |
| - uses: actions/checkout@v7.0.0 | |
| with: | |
| path: 'galaxy root' | |
| persist-credentials: false | |
| - name: Install uv | |
| uses: astral-sh/setup-uv@v8.2.0 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python | |
| run: uv python install | |
| - name: Run tests | |
| run: ./run_tests.sh --coverage --skip_flakey_fails -cwl lib/galaxy_test/api/cwl -- -m "${{ matrix.marker }} and ${{ matrix.conformance-version }}" | |
| working-directory: 'galaxy root' | |
| - uses: codecov/codecov-action@v7.0.0 | |
| with: | |
| flags: cwl-conformance | |
| working-directory: 'galaxy root' | |
| - uses: actions/upload-artifact@v7 | |
| if: failure() | |
| with: | |
| name: CWL conformance test results (${{ matrix.python-version }}, ${{ matrix.marker }}, ${{ matrix.conformance-version }}) | |
| path: 'galaxy root/run_cwl_tests.html' |