galaxy_codex/_includes/communities/microgalaxy/tools.html at fd5e067b69ad76023bf1839cdaa071c4924cb5dc · galaxyproject/galaxy_codex · GitHub

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{%- if include.tag %}
{%- assign tools = site.data.communities.microgalaxy.curated_tools | add_related_pages | where:"related_pages", include.tag  | sort_natural: "name" %}
{%- else %}
{%- assign tools = site.data.communities.microgalaxy.curated_tools | add_related_pages  | sort_natural: "name" %}
{%- endif %}
{%- assign country_pages = site.pages | where_exp: "item", "item.search_exclude != true" | where_exp:"item","item.national_resources != nil" %}
{%- unless tools.size == 0 or tools == nil %}
<a class="visually-hidden-focusable" href='#skip-tool-table'>Skip tool table</a>
<div class="table-responsive mt-4 mb-5">
    <table class="tooltable table display table-bordered table-striped w-100">
        <thead>
            <tr>
                <th style="text-align: center">Suite ID</th>
                <th style="text-align: center">Suite version</th>
                <th style="text-align: center">Date of first commit of the suite</th>
                <th style="text-align: center">Tool IDs</th>
                <th style="text-align: center">Description</th>
                <th style="text-align: center">EDAM topic(s)</th>
                <th style="text-align: center">EDAM operation(s)</th>
                <th style="text-align: center">Suite runs on main servers</th>
                <th style="text-align: center">bio.tools (if available)</th>
                <th style="text-align: center">Conda id</th>
                <th style="text-align: center">biii</th>
                <th style="text-align: center">Status</th>
                <th style="text-align: center">Availability across Galaxies</th>
            </tr>
        </thead>
        <tbody>
            {%- for tool in tools %}
            <tr>
                <td>
                <div>
                  {% if tool.["Suite ID"] != "" %}
                    <a href='{{ tool.["Suite source"] }}'>{{ tool.["Suite ID"] }}</a>
                  {% else %}
                    <a href="#">{{ tool.["Suite ID"] }}</a>
                  {% endif %}
                </div>
                </td>
                <td style="text-align: center">{{tool.["Suite version"]}}</td>
                <td style="text-align: center">{{tool.["Date of first commit of the suite"]}}</td>
                <td style="text-align: center">
                    {% if tool.["Tool IDs"] %} {%- for id in tool.["Tool IDs"] %}
                    <span class="badge text-bg-light">
                        {{id}}
                    </span>
                    {%- endfor %} {%- endif %}
                </td>
                <td>{{tool.Description}}</td>
                <td style="text-align: center">
                    {% if tool.["EDAM topics"] %} {%- for topic in tool.["EDAM topics"] %}
                    <span class="badge text-bg-light">
                        {{topic}}
                    </span>
                    {%- endfor %} {%- endif %}
                </td>
                <td style="text-align: center">
                    {% if tool.["EDAM operations"] %} {%- for operation in tool.["EDAM operations"] %}
                    <span class="badge text-bg-light">
                        {{operation}}
                    </span>
                    {%- endfor %} {%- endif %}
                </td>
                <td style="text-align: center">{{tool.["Suite runs on main servers"]}}</td>
                <td style="text-align: center">
                <div>
                  {% if tool.["bio.tool ID"] != "null" %}
                    <a href='https://bio.tools/{{ tool.["bio.tool ID"] }}'>{{ tool.["bio.tool ID"] }}</a>
                  {% else %}
                    <a href="#">""</a>
                  {% endif %}
                </div>
                </td>
                <td style="text-align: center">
                <div>
                  {% if tool.["Suite conda package"] != "null" %}
                    <span class="badge text-bg-light">
                        {{ tool.["Suite conda package"] }}
                    </span>
                  {% endif %}
                </div>
                </td>
                <td style="text-align: center">
                <div>
                  {% if tool.["biii ID"] != "null" %}
                    <span class="badge text-bg-light">
                        {{ tool.["biii ID"] }}
                    </span>
                  {% endif %}
                </div>
                </td>
                <td>{{tool.["Suite version status"]}}</td>
                <td>
                <div>
                  {% if tool.availability %} {%- for instance in tool.availability %}
                    <span class="badge text-bg-light">
                        {{instance}}
                    </span>
                  {%- endfor %} {%- endif %}
                </div>
                </td>
            </tr>
            {%- endfor %}
        </tbody>
    </table>
</div>
{%- endunless %}
<div id="skip-tool-table"></div>