Fix CI

Author: stefanistrate

.github/workflows/python_style_checks.yml

@@ -20,11 +20,8 @@ jobs:
           python-version: ${{ matrix.python-version }}
       - name: Install dependencies
         run: |
-          python -m venv .direnv
-          source .direnv/bin/activate
           python -m pip install --upgrade pip setuptools wheel
           python -m pip install -e .[github]
-          echo "$PWD/.direnv/bin" >> "$GITHUB_PATH"
       - name: Check formatting with black
         if: always()
         run: |

.github/workflows/python_tests.yml

@@ -20,11 +20,8 @@ jobs:
           python-version: ${{ matrix.python-version }}
       - name: Install dependencies
         run: |
-          python -m venv .direnv
-          source .direnv/bin/activate
           python -m pip install --upgrade pip setuptools wheel
           python -m pip install -e .[github]
-          echo "$PWD/.direnv/bin" >> "$GITHUB_PATH"
       - name: Run tests with pytest
         if: always()
         run: |

pyproject.toml

@@ -86,12 +86,9 @@ dev = [
     "pymarkdownlnt",
     "pyright",
     "pytest",
-    "pytest-cov",
-    "pytest-repeat",
-    "pytest-reverse",
 ]
 github = [
-    "speciesnet[all]",
+    "speciesnet[dev]",
     "pytest-custom_exit_code",
 ]