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Co-authored-by: cgreene <542643+cgreene@users.noreply.github.com>
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- id: doi:10.5281/zenodo.15597460
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title: hetionet-analysis
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authors:
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- Sutanu Nandi
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- Negar Janani
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- Dave Bunten
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- Casey Greene
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publisher: Zenodo
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date: '2025-06-05'
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link: https://doi.org/g9pm9s
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orcid: 0000-0001-8713-9213
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member: casey-greene
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- id: doi:10.5281/zenodo.15485442
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title: Manubot AI Editor
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authors:
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- Milton Pividori
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- Faisal Alquaddoomi
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- Vincent Rubinetti
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- Dave Bunten
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- Casey Greene
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publisher: Zenodo
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date: '2025-05-21'
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link: https://doi.org/g9k849
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orcid: 0000-0001-8713-9213
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member: casey-greene
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- id: doi:10.5281/zenodo.15122187
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title: Human Microbiome Compendium dataset
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authors:
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- Sean Davis
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- Ran Blekhman
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publisher: Zenodo
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date: '2024-09-16'
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date: '2025-04-01'
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link: https://doi.org/gsvhxn
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orcid: 0000-0001-8713-9213
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- Dave Bunten
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publisher: Zenodo
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date: '2025-02-22'
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date: '2025-05-21'
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link: https://doi.org/g855cq
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- id: doi:10.5524/102479
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title: 'Supporting data for "The probability of edge existence due to node degree:
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a baseline for network-based predictions"'
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authors:
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- Michael Zietz
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- Daniel, S Himmelstein
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- Kyle Kloster
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- Christopher Williams
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- Michael, W Nagle
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- Casey, S Greene
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publisher: GigaScience Database
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date: '2023-01-01'
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link: https://doi.org/gs9sq5
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orcid: 0000-0001-8713-9213
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- id: doi:10.1128/msystems.00928-22
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title: The Coming of Age of Nucleic Acid Vaccines during COVID-19
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authors:
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tags:
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- machine learning
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- diversity
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- id: doi:10.17615/vzc0-qk25
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title: 'Author Correction: Community-wide hackathons to identify central themes
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in single-cell multi-omics'
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authors: []
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publisher: Springer Nature
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date: '2021-01-01'
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title: 'Author Correction: Community-wide hackathons to identify central themes
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in single-cell multi-omics'
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- type: preprint
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- type: medRxiv
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link: https://www.biorxiv.org/content/2021.06.23.21259416
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- id: doi:10.17615/edpt-y058
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title: 'Characterizing Long COVID: Deep Phenotype of a Complex Condition'
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authors: []
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publisher: Elsevier
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date: '2021-01-01'
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link: https://doi.org/g9kjv5
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orcid: 0000-0001-8713-9213
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title: Community-wide hackathons to identify central themes in single-cell multi-omics
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title: Community-wide hackathons to identify central themes in single-cell multi-omics
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authors: []
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publisher: Springer Nature
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date: '2021-01-01'
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- id: doi:10.1128/mSystems.00122-21
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title: Dietary Supplements and Nutraceuticals under Investigation for COVID-19 Prevention
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and Treatment
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tags:
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- reproducibility
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- machine learning
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- id: doi:10.5524/100921
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title: Supporting data for "Genetic demultiplexing of pooled single-cell RNA-sequencing
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samples in cancer facilitates effective experimental design"
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authors:
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- Lukas, M Weber
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- Ariel, A Hippen
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- Peter, F Hickey
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- Kristofer, C Berrett
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- Jason Gertz
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- Jennifer, Anne Doherty
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- Casey, S Greene
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- Stephanie, C Hicks
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publisher: GigaScience Database
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date: '2021-01-01'
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link: https://doi.org/g9mwd9
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orcid: 0000-0001-8713-9213
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- id: doi:10.48550/arxiv.2105.14372
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title: Ten Quick Tips for Deep Learning in Biology
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authors:
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- Sean Davis
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- Ran Blekhman
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publisher: Cell
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date: '2025-01-01'
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date: '2025-02-01'
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link: https://doi.org/g82tvz
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image: https://greenelab.com/images/research/405730965-4a33a603-dce7-4e31-a9fc-d2a939892749.jpg
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plugin: sources.py

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