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GEGImageClassifier.pl
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1214 lines (970 loc) · 25.2 KB
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use strict;
use warnings;
use Tk;
use Tk::widgets qw(JPEG);
use Tk::DialogBox;
use Tk::LabEntry;
use Image::Grab;
use Tk::NoteBook;
my (
$coordinateFileName, # name of the coordinate input file
$saveFileName, # name of the save file
$loadedSaveFileName, # name of the previous save file
$comparisonFileName, # name of the comparison input file
$urlFileName, # name of the file where the URL is saved
$imageLabel, # handle to the image display area
$nameLabel, # handle to the name display area
$urlEntry, # handle to the url display area
$msgLabel, # handle to the message display area
$backButton, # handle to the back button in the menu
$resumeButton, # handle to the resume button in the menu
$searchWindow, # handle to the Tk::Toplevel instance that contains the search window
$searchButton, # handle to the search button in the menu
$resetButton, # handle to the reset button in the menu
$defaultBGColor, # system default color for the label widget
$tmpFileName, # name of file where current image binary is located
$scaleIndex, # zoom scale (1 to 10)
$comparisonMode, # boolean flag to determine if in comparison mode
$done, # boolean flag to determine if no more classifications are to be done
$classification, # current classification selected by the user
$objectListIsDirty, # boolean flag to determine if list has been updated
@objectsToClassify, # list of objects to classify
$curObjectIndex, # index to the current object being displayed
$imageURL, # URL for fetching the image to display
$sdssSite, # SDSS DR7 image tool URL
$mw, # handle to a Tk::MainWindow
$hasBegun, # flag to determine if classification has begun
$invertColorsOpt, # pass the "invert color" option to the SDSS DR7 ImageTool
$labelOpt, # pass the "label" option to the SDSS DR7 ImageTool
$gridOpt, # pass the "grid" option to the SDSS DR7 ImageTool
);
$tmpFileName = '__tmp__.jpeg';
$scaleIndex = 3;
$comparisonMode = 0;
$done = 0;
$objectListIsDirty = 0;
@objectsToClassify = ();
$curObjectIndex = 0;
$hasBegun = 0;
$imageURL = 'http://casjobs.sdss.org/ImgCutoutDR7/getjpeg.aspx?width=512&height=341';
$sdssSite = 'http://cas.sdss.org/astro/en/tools/chart/navi.asp?';
$invertColorsOpt = $labelOpt = $gridOpt = '';
$mw = MainWindow->new();
$mw->title('Galaxy Evolution Group Image Classifier');
# handle window closing with the quit function
$mw->protocol('WM_DELETE_WINDOW' => \&quit);
&setupMainWindow;
# bind the keyboard shortcuts
$mw->bind('<Control-Key-s>' => \&saveToFile);
$mw->bind('<Control-Shift-Key-S>' => \&saveAs);
$mw->bind('<Control-Key-q>' => \&quit);
$mw->bind('<Control-Key-b>' => \&goBack);
$mw->bind('<Control-Key-r>' => \&resume);
$mw->bind('<Control-Key-f>' => \&openSearchWindow);
$mw->bind('<Key-space>' => \&lazyClick);
$mw->bind('<Control-Key-u>' => \&saveURL);
$defaultBGColor = $msgLabel->cget('-background');
MainLoop;
sub setImage
{
return if ($done || !$hasBegun);
my $curObjectRef = shift;
my $pic = new Image::Grab;
my $image = undef;
my ($name, $ra, $dec) = @{$curObjectRef}{'name', 'ra', 'dec'};
my $url = $imageURL . '&opt=' . $invertColorsOpt.$labelOpt.$gridOpt .
'&ra=' . $ra . '&dec=' . $dec . '&scale=' . ($scaleIndex * 0.1);
$pic->url($url);
$pic->grab();
if (defined $pic->image)
{
open($image, '>', $tmpFileName);
print $image $pic->image;
close $image;
$image = $mw->Photo(-file => $tmpFileName);
$imageLabel->configure(-image => $image);
}
else
{
$imageLabel->configure(-image => undef);
&showError("No image found for $name at ($ra, $dec).");
return;
}
$nameLabel->configure(-text => $name . ' (' . ($curObjectIndex + 1) . ' of ' . scalar @objectsToClassify . ')');
$urlEntry->configure(-text => $sdssSite . 'ra=' . $ra . '&dec=' . $dec);
$mw->update;
}
sub quit
{
if ($objectListIsDirty)
{
return if (&promptForSave('quitting') != 0);
}
$mw->destroy();
unlink $tmpFileName;
exit;
}
sub reset
{
return if ($resetButton->cget('-state') eq 'disabled' || ($objectListIsDirty && &promptForSave('resetting') != 0));
($coordinateFileName, $saveFileName, $loadedSaveFileName, $comparisonFileName, $urlFileName) = (undef, undef, undef, undef, undef);
($searchWindow, $scaleIndex) = (undef, 3);
($comparisonMode, $done, $classification, $objectListIsDirty) = (0, 0, undef, 0);
@objectsToClassify = ();
$curObjectIndex = 0;
$hasBegun = 0;
&resetMessage;
# if reset is called after a file load error before a 'Run' is selected, these won't work.
$urlEntry->delete(0, 'end') if defined $urlEntry;
$nameLabel->configure(-text => '') if defined $nameLabel;
$mw->update;
}
sub promptForSave
{
my $action = shift || 'continuing';
my $response = $mw->messageBox(
-message => "There is unsaved data. Save before $action?",
-title => "Save before $action",
-type => 'yesnocancel',
-icon => 'question'
);
if ($response eq 'Yes')
{
return -1 if (&saveToFile != 0);
}
elsif ($response eq 'Cancel')
{
return -1;
}
elsif ($response eq 'No')
{
return 0;
}
return 0;
}
sub showWarning
{
my $msg = shift || 'error';
my $isFatal = shift || 0;
$msgLabel->configure(-text => $msg, -font => 'Helvetica 12 bold', -background => 'yellow');
$done = 1 if $isFatal;
}
sub showError
{
my $msg = shift || 'error';
$msgLabel->configure(-text => $msg, -font => 'Helvetica 12 bold', -background => 'red');
$done = 1;
&deactivateNavigationButtons;
# turn on reset in case $hasBegun == false
$resetButton->configure(-state => 'active');
}
sub loadGeneralClassifierGrid
{
my $parent = shift;
my $row = 1;
$parent->Radiobutton(
-text => 'spiral',
-variable => \$classification,
-value => 's',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 1, -columnspan => 2);
$parent->Radiobutton(
-text => 'elliptical',
-variable => \$classification,
-value => 'e',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 3, -columnspan => 2);
$parent->Radiobutton(
-text => 'peculiar (tails)',
-variable => \$classification,
-value => 'pt',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 5, -columnspan => 2);
$row++;
$parent->Radiobutton(
-text => 'inclined disk',
-variable => \$classification,
-value => 'id',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 1, -columnspan => 2);
$parent->Radiobutton(
-text => 'elliptical+',
-variable => \$classification,
-value => 'e+',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 3, -columnspan => 2);
$parent->Radiobutton(
-text => 'unknown',
-variable => \$classification,
-value => 'u',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 5, -columnspan => 2);
$row++;
$parent->Radiobutton(
-text => 'inner ring',
-variable => \$classification,
-value => 'ir',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 1, -columnspan => 2);
$parent->Radiobutton(
-text => 'peculiar',
-variable => \$classification,
-value => 'p',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 3, -columnspan => 2);
$parent->Radiobutton(
-text => 'merger',
-variable => \$classification,
-value => 'm',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 5, -columnspan => 2);
}
sub loadMergerClassifierGrid
{
my $parent = shift;
my $row = 1;
$parent->Radiobutton(
-text => 'merger',
-variable => \$classification,
-value => 'm',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 1, -columnspan => 2);
$parent->Radiobutton(
-text => 'contaminant',
-variable => \$classification,
-value => 'c',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 3, -columnspan => 2);
$parent->Radiobutton(
-text => 'wet remnant',
-variable => \$classification,
-value => 'w',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 5, -columnspan => 2);
$parent->Radiobutton(
-text => 'dry remnant',
-variable => \$classification,
-value => 'd',
-command => \&classifyImage_Click
)->grid(-sticky => 'nw', -row => $row, -column => 7, -columnspan => 2);
}
sub setupClassifierGrid
{
my $row = 18;
my $tabs = $mw->NoteBook()->grid('-sticky' => 'ew', '-row' => $row, '-column' => 1, '-columnspan' => 10);
my $tabRef = $tabs->add('General', '-label' => 'General');
$tabs->pageconfigure('General', '-createcmd' => [\&loadGeneralClassifierGrid, $tabRef]);
$tabRef = $tabs->add('Mergers', '-label' => 'Mergers');
$tabs->pageconfigure('Mergers', '-raisecmd' => [\&loadMergerClassifierGrid, $tabRef]);
$mw->Label(-text => '')->grid(-row => ++$row, -rowspan => 2);
$row += 3;
$mw->Label(-text => 'Zoom:')->grid(-sticky => 'ew', -row => $row, -column => 1);
$mw->Button(
-text => 'In',
-width => 4,
-command => [\&zoom, 'in']
)->grid(-sticky => 'e', -row => $row, -column => 2);
$mw->Button(
-text => 'Out',
-width => 4,
-command => [\&zoom, 'out']
)->grid(-sticky => 'w', -row => $row, -column => 3);
$mw->Checkbutton(
'-text' => 'invert',
'-onvalue' => 'I',
'-offvalue' => '',
'-variable' => \$invertColorsOpt,
'-command' => \&setupImage
)->grid(-sticky => 'w', -row => $row, -column => 4);
$mw->Checkbutton(
'-text' => 'label',
'-onvalue' => 'L',
'-offvalue' => '',
'-variable' => \$labelOpt,
'-command' => \&setupImage
)->grid(-sticky => 'w', -row => $row, -column => 6);
$mw->Checkbutton(
'-text' => 'grid',
'-onvalue' => 'G',
'-offvalue' => '',
'-variable' => \$gridOpt,
'-command' => \&setupImage
)->grid(-sticky => 'w', -row => $row, -column => 8);
$mw->Label(-text => '')->grid(-row => ++$row, -rowspan => 3);
$row += 4;
$mw->Label(-text => 'URL:')->grid(-sticky => 'ew', -row => $row, -column => 1);
$urlEntry = $mw->Entry(
-text => '',
-font => 'Helvetica 8',
-width => 75
)->grid(-sticky => 'nw', -row => $row, -column => 1, -columnspan => 10);
}
sub setupMainWindow
{
$mw->configure(-menu => my $menubar = $mw->Menu);
my $file = $menubar->cascade(-label => 'File', -tearoff => 0);
my $run = $menubar->cascade(-label => 'Run', -tearoff => 0);
my $nav = $menubar->cascade(-label => 'Navigate', -tearoff => 0);
# my $help = $menubar->cascade(-label => 'Help ', -tearoff => 0);
my $runClassify = $run->cascade(-label => 'Classify', -tearoff => 0);
my $runCompare = $run->cascade(-label => 'Compare', -tearoff => 0);
$file->command(
-label => 'Load coords',
-underline => -1,
-command => \&promptForCoordinateFileName
);
$file->separator;
$file->command(
-label => 'Load previous save',
-underline => -1,
-command => \&promptForLoadedSaveFileName
);
$file->command(
-label => 'Load comparison',
-underline => -1,
-command => \&promptForComparisonFileName
);
$file->separator();
$file->command(
-label => 'Save',
-accelerator => 'ctrl-s',
-command => \&saveToFile
);
$file->command(
-label => 'Save As',
-accelerator => 'ctrl-shift-s',
-command => \&saveAs
);
$file->separator;
# workaround for Macs not being able to copy/paste the text
# out of the URL box.
$file->command(
-label => 'Save URL',
-accelerator => 'ctrl-u',
-underline => -1,
-command => \&saveURL
);
$file->separator;
$file->command(
-label => 'Quit',
-accelerator => 'ctrl-q',
-underline => -1,
-command => \&quit
);
$runClassify->command(
-label => 'New',
-underline => -1,
-command => \&runClassifyNew
);
$runClassify->command(
-label => 'Continue',
-underline => -1,
-command => \&runClassifyContinue
);
$runCompare->command(
-label => 'New',
-underline => -1,
-command => \&runComparisonNew
);
$runCompare->command(
-label => 'Continue',
-underline => -1,
-command => \&runComparisonContinue
);
$run->separator;
$resetButton = $run->command(
-label => 'Reset',
-underline => -1,
-command => \&reset,
-state => 'disabled'
);
$backButton = $nav->command(
-label => 'Back',
-underline => -1,
-state => 'disabled',
-accelerator => 'ctrl-b',
-command => \&goBack
);
$resumeButton = $nav->command(
-label => 'Resume',
-underline => -1,
-state => 'disabled',
-accelerator => 'ctrl-r',
-command => \&resume
);
$searchButton = $nav->command(
-label => 'Search',
-underline => -1,
-command => \&openSearchWindow,
-accelerator => 'ctrl-f',
-state => 'disabled'
);
# $help->command(
# -label => 'Help',
# -underline => -1,
# -state => 'disabled'
# );
#
# $help->separator;
#
# $help->command(
# -label => 'About',
# -underline => -1,
# -state => 'disabled'
# );
my $imageFrame = $mw->Frame->grid(-sticky => 'nw', -row => 1, -column => 1, -columnspan => 10, -rowspan => 10);
$mw->geometry('550x650');
$imageLabel = $imageFrame->Label()->grid();
$nameLabel = $mw->Label(
-text => '',
-font => 'Helvetica 12'
)->grid(-sticky => 'nw', -row => 15, -column => 1, -columnspan => 10);
$msgLabel = $mw->Label(-text => '')->grid(-sticky => 'ew', -row => 16, -column => 1, -columnspan => 10);
$mw->Label(-text => '')->grid(-row => 17);
}
sub runClassifyNew
{
if ($done || $hasBegun)
{
&showWarning('Reset before starting a new classification.');
return;
}
unless (defined $coordinateFileName)
{
&showWarning('No coordinate file loaded!');
return;
}
return if (&readCoordinateFile != 0);
$hasBegun = 1;
&setupClassifierGrid;
&resetMessage;
&activateNavigationButtons;
&setupImage;
}
sub runClassifyContinue
{
if ($done || $hasBegun)
{
&showWarning('Reset before starting a new classification.');
return;
}
unless (defined $coordinateFileName)
{
&showWarning('No coordinate file loaded!');
return;
}
unless (defined $loadedSaveFileName)
{
&showWarning('No save file loaded!');
return;
}
return unless (&readCoordinateFile == 0 && &readLoadedSaveFile == 0);
my $found = &findLastClassified;
if ($found < 0)
{
&showWarning('All objects have been classified.');
return;
}
else
{
$curObjectIndex = $found;
}
$hasBegun = 1;
&setupClassifierGrid;
&resetMessage;
&activateNavigationButtons;
&setupImage;
}
sub runComparisonNew
{
if ($done || $hasBegun)
{
&showWarning('Reset before starting a new comparison.');
return;
}
unless (defined $coordinateFileName)
{
&showWarning('No coordinate file loaded!');
return;
}
unless (defined $comparisonFileName)
{
&showWarning('No comparison file loaded!');
return;
}
$comparisonMode = 1;
return if (&readCoordinateFile != 0 || &readComparisonFile != 0);
$hasBegun = 1;
&setupClassifierGrid;
&resetMessage;
&activateNavigationButtons;
&setupImage;
}
sub runComparisonContinue
{
if ($done || $hasBegun)
{
&showWarning('Reset before starting a new comparison.');
return;
}
unless (defined $coordinateFileName)
{
&showWarning('No coordinate file loaded!');
return;
}
unless (defined $comparisonFileName)
{
&showWarning('No comparison file loaded!');
return;
}
unless (defined $loadedSaveFileName)
{
&showWarning('No save file loaded!');
return;
}
$comparisonMode = 1;
return if (&readCoordinateFile != 0 || &readComparisonFile != 0 || &readLoadedSaveFile != 0);
my $found = &findLastClassified;
if ($found < 0)
{
&showWarning('All objects have been classified.', 1);
return;
}
else
{
$curObjectIndex = $found;
}
$hasBegun = 1;
&setupClassifierGrid;
&resetMessage;
&activateNavigationButtons;
&setupImage;
}
sub findLastClassified
{
my $found = 0;
my $i = 0;
for (; $i < scalar @objectsToClassify; $i++)
{
unless (defined $objectsToClassify[$i]->{'classification'})
{
$found = 1;
last;
}
}
return $i if $found;
return -1;
}
sub promptForCoordinateFileName
{
if ($done || $hasBegun)
{
&showWarning('Reset before loading a new coordinate file.');
return;
}
my $tmpCoordinateFileName = $mw->getOpenFile(-title => 'Load coordinate file');
return unless (defined $tmpCoordinateFileName);
$coordinateFileName = $tmpCoordinateFileName;
}
sub promptForComparisonFileName
{
if ($done || $hasBegun)
{
&showWarning('Reset before loading a new comparison file.');
return;
}
my $tmpComparisonFileName = $mw->getOpenFile(-title => 'Load comparison file');
return unless (defined $tmpComparisonFileName);
$comparisonFileName = $tmpComparisonFileName;
}
sub promptForLoadedSaveFileName
{
if ($done || $hasBegun)
{
&showWarning('Reset before loading a new previous save.');
return;
}
my $tmpLoadedSaveFileName = $mw->getOpenFile(-title => 'Load save file');
return unless (defined $tmpLoadedSaveFileName);
$loadedSaveFileName = $tmpLoadedSaveFileName;
}
sub saveAs
{
return unless $hasBegun;
my $tmpSaveFileName = $mw->getSaveFile(-title => 'Select save file');
return unless (defined $tmpSaveFileName);
$saveFileName = $tmpSaveFileName;
&saveToFile;
}
sub readCoordinateFile
{
my $fdCoordinateInput = undef;
eval {open $fdCoordinateInput, '<', $coordinateFileName};
if ($@)
{
&showError($@);
return -1;
}
my ($name, $ra, $dec);
while (my $line = <$fdCoordinateInput>)
{
chomp($line);
next if ($line =~ m/^#/ || $line eq '');
($name, $ra, $dec) = split(",", $line);
&trim(\$name);
&trim(\$ra);
&trim(\$dec);
unless (defined $name
&& $name ne ''
&& defined $ra
&& $ra ne ''
&& defined $dec
&& $dec ne '')
{
&showError("Error in coordinate file on line $..");
return -1;
}
push @objectsToClassify, {'name' => $name, 'ra' => $ra, 'dec' => $dec};
}
return 0;
}
sub readLoadedSaveFile
{
# by default, make the save file the same as the one that was loaded
$saveFileName = $loadedSaveFileName;
my $fdLoadedSave = undef;
eval {open $fdLoadedSave, '<', $loadedSaveFileName};
if ($@)
{
&showError($@);
return -1;
}
my ($name, $class, $found);
while (my $line = <$fdLoadedSave>)
{
chomp($line);
next if ($line =~ m/^#/ || $line eq '');
($name, $class) = split(",", $line);
unless (defined $name
&& $name ne ''
&& defined $class
&& $class ne '')
{
&showError("Error in loaded save file on line $..");
return -1;
}
&trim(\$name);
&trim(\$class);
for (my $i = 0; $i < scalar @objectsToClassify; $i++)
{
if ($objectsToClassify[$i]->{'name'} eq $name)
{
$objectsToClassify[$i]->{'classification'} = $class;
$found = 1;
last;
}
}
if (!$found)
{
&showError("Could not find $name from save file in coordinate file.");
return -1;
}
$found = 0;
}
return 0;
}
sub readComparisonFile
{
my $fdComparison = undef;
eval {open $fdComparison, '<', $comparisonFileName};
if ($@)
{
&showError($@);
return -1;
}
my ($name, $class, $found);
$found = 0;
while (my $line = <$fdComparison>)
{
chomp($line);
next if ($line =~ m/^#/ || $line eq '');
($name, $class) = split(",", $line);
unless (defined $name
&& $name ne ''
&& defined $class
&& $class ne '')
{
&showError("Error in comparison file on line $..");
return -1;
}
&trim(\$name);
&trim(\$class);
for (my $i = 0; $i < scalar @objectsToClassify; $i++)
{
if ($objectsToClassify[$i]->{'name'} eq $name)
{
$objectsToClassify[$i]->{'prevClassification'} = $class;
$found = 1;
last;
}
}
if (defined $name && !$found)
{
&showError("Could not find $name from comparison file in coordinate file.");
return -1;
}
$found = 0;
}
return 0;
}
sub saveToFile
{
unless ($objectListIsDirty)
{
return 0;
}
unless (defined $saveFileName)
{
$saveFileName = $mw->getSaveFile(-title => 'Select save file');
return -1 unless (defined $saveFileName);
}
my $fdSave = undef;
eval {open $fdSave, '>', $saveFileName};
if ($@)
{
showWarning($@);
return -1;
}
if ($comparisonMode)
{
print $fdSave '# name,class_new,class_old', "\n";
map {
if (defined $_->{'classification'})
{
print $fdSave join ",", @{$_}{'name', 'classification', 'prevClassification'};
print $fdSave "\n";
}
} @objectsToClassify;
}
else
{
print $fdSave '# name,class', "\n";
map {
if (defined $_->{'classification'})
{
print $fdSave join ",", @{$_}{'name', 'classification'};
print $fdSave "\n";
}
} @objectsToClassify;
}
close($fdSave);
$objectListIsDirty = 0;
return 0;
}
sub lazyClick
{
return unless ($hasBegun && $comparisonMode);
&classifyImage_Click;
}
sub classifyImage_Click
{
return unless $hasBegun;
$objectsToClassify[$curObjectIndex]->{'classification'} = $classification;
$objectListIsDirty = 1;
$curObjectIndex++;
&resetMessage;
&setupImage;
}
sub activateNavigationButtons
{
$backButton->configure(-state => 'active');
$resumeButton->configure(-state => 'active');
$searchButton->configure(-state => 'active');
$resetButton->configure(-state => 'active');
}
sub deactivateNavigationButtons
{
# deactivate all buttons except the reset button
$backButton->configure(-state => 'disabled');
$resumeButton->configure(-state => 'disabled');
$searchButton->configure(-state => 'disabled');
}
sub setupImage
{
if ($done || !$hasBegun)
{
&showError('Reset before continuing.');
return;