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~/.local/lib/python3.8/site-packages/hddm/models/base.py in plot_posterior_predictive(self, *args, **kwargs)
766 if 'value_range' not in kwargs:
767 kwargs['value_range'] = np.linspace(-5, 5, 100)
--> 768 kabuki.analyze.plot_posterior_predictive(self, *args, **kwargs)
769
770 def plot_posterior_quantiles(self, *args, **kwargs):
~/.local/lib/python3.8/site-packages/kabuki/analyze.py in plot_posterior_predictive(model, plot_func, required_method, columns, save, path, figsize, format, num_subjs, **kwargs)
558 ax.set_title(str(bottom_node['subj_idx']))
559
--> 560 plot_func(bottom_node['node'], ax, **kwargs)
561
562 if num_subjs is not None and i >= num_subjs:
~/.local/lib/python3.8/site-packages/kabuki/analyze.py in _plot_posterior_pdf_node(bottom_node, axis, value_range, samples, bins, normed)
476 # Plot data
477 if len(bottom_node.value) != 0:
--> 478 axis.hist(bottom_node.value.values, normed=True, color='r',
479 range=(value_range[0], value_range[-1]), label='data',
480 bins=bins, histtype='step', lw=2.)
Keyword normed
is deprecated in matplotlib and replaced by density
.
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