Neuroinflammation in Huntington's Disease: new insights with 11C-PBR28 PET/MRI

This is the companion code and data for the research paper "Neuroinflammation in Huntington's Disease: new insights with 11C-PBR28 PET/MRI", by Cristina Lois, Iván González, David Izquierdo-García, Nicole R. Zürcher, Paul Wilkens, Marco L. Loggia, Jacob M. Hooker, and Diana H. Rosas.

Running the code

You can run the code from your browser by clicking here:

Alternatively you can download the code and run it in your computer as a Jupyter notebook:

1. Download this repo and unzip it.
2. Install Anaconda for your operating system.
3. Create an new conda environment and activate it, and run a jupyter notebook:

$ cd huntington-with-pbr28
$ conda create --name huntington-with-28 -f environment.yml jupyter
$ source activate
$ jupyter notebook

Interactive viewer for the images

You can get an interactive view of the MNI images at neurovault.org

Citation

This is research work. In case you use any of this code or data, please cite our paper:

@unpublished{lois2016,
author={Cristina Lois, Iv\'an Gonz\'alez, David Izquierdo-Garc\'{\i}a, Nicole R. Z\"urcher, Paul Wilkens, Marco L. Loggia, Jacob M. Hooker, and Diana H. Rosas},
title={Neuroinflammation in Huntington's Disease: new insights with [$^{11}$C]-PBR28 PET/MRI},
year={2016},
note={to be published}
}

License

Both the code are data are distributed under open licenses. The code is distributed under the MIT license (see LICENSE). The data (i.e. the files under data/) is distributed under the CC0 license (see LICENSE).