first version

Author: hutaobo

.github/workflows/publish-pypi.yml

@@ -0,0 +1,35 @@
+name: publish-pypi
+
+on:
+  release:
+    types: [published]
+
+jobs:
+  build-and-publish:
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      - name: Upgrade build tooling
+        run: python -m pip install --upgrade pip build
+
+      - name: Build sdist and wheel
+        run: python -m build
+
+      # 可选健检：显示产物
+      - name: List dist artifacts
+        run: ls -l dist
+
+      - name: Publish to PyPI
+        uses: pypa/gh-action-pypi-publish@v1.12.4
+        with:
+          user: __token__
+          password: ${{ secrets.PYPI_API_TOKEN }}
+          # skip-existing: true   # 若你想忽略已存在版本，可取消注释

.github/workflows/publish-testpypi.yml

@@ -0,0 +1,34 @@
+name: publish-testpypi
+
+on:
+  workflow_dispatch: {}
+
+jobs:
+  build-and-publish-testpypi:
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      - name: Upgrade build tooling
+        run: python -m pip install --upgrade pip build
+
+      - name: Build sdist and wheel
+        run: python -m build
+
+      - name: List dist artifacts
+        run: ls -l dist
+
+      - name: Publish to TestPyPI
+        uses: pypa/gh-action-pypi-publish@v1.12.4
+        with:
+          user: __token__
+          password: ${{ secrets.TEST_PYPI_API_TOKEN }}
+          repository-url: https://test.pypi.org/legacy/
+          # skip-existing: true   # 可选

.github/workflows/publish.yml

@@ -5,9 +5,9 @@ Toolkit for combining **Spatial Transcriptomics** with **Perturb-seq** workflows
 ## Install
 
 ```bash
-pip install spatialperturb
+pip install SpatialPerturb
 # or with GNN extras:
-pip install 'spatialperturb[gnn]'
+pip install 'SpatialPerturb[gnn]'
 ```
 
 ## Quick start
@@ -20,7 +20,7 @@ print(sp.__version__)
 
 CLI:
 ```bash
-spatialperturb version
+SpatialPerturb version
 ```
 
 ## Development

.idea/misc.xml

@@ -3,7 +3,7 @@ requires = ["setuptools>=69", "wheel"]
 build-backend = "setuptools.build_meta"
 
 [project]
-name = "spatialperturb"
+name = "SpatialPerturb"
 version = "0.1.0"
 description = "Spatial transcriptomics × Perturb-seq toolkit: signatures, label transfer, spatial scoring, and graph-based modeling."
 readme = "README.md"