pathology-evidence-ai/pyproject.toml at main · hutaobo/pathology-evidence-ai · GitHub

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[build-system]
requires = ["setuptools>=69", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "pathology-evidence-ai"
version = "0.1.0"
description = "Local pathology PDF ingestion, AI-assisted retrieval, and citation-backed evidence workspace."
readme = "README.md"
requires-python = ">=3.11"
license = {file = "LICENSE"}
dependencies = [
  "fastapi>=0.115.0",
  "httpx>=0.28.0",
  "openai>=1.75.0",
  "orjson>=3.10.0",
  "pdfplumber>=0.11.0",
  "pgvector>=0.3.6",
  "pydantic>=2.10.0",
  "pydantic-settings>=2.7.0",
  "psycopg[binary]>=3.2.0",
  "pymupdf>=1.27.0",
  "python-multipart>=0.0.20",
  "pypdf>=6.0.0",
  "python-dotenv>=1.0.1",
  "pyyaml>=6.0.2",
  "sqlalchemy>=2.0.36",
  "tenacity>=9.0.0",
  "tiktoken>=0.9.0",
  "typer>=0.16.0",
  "uvicorn>=0.34.0",
]

[project.optional-dependencies]
dev = [
  "pytest>=8.3.0",
  "ruff>=0.11.0",
]

[project.scripts]
pathology-api = "apps.pathology_api.main:run"
pathology-ingest = "apps.ingest_worker.cli:main"
pathology-train = "apps.train_worker.cli:main"
pathology-eval = "apps.eval_worker.cli:main"
pathology-client = "apps.pathology_client.cli:main"

[tool.setuptools]
package-dir = {"" = "."}

[tool.setuptools.packages.find]
include = ["apps*", "src*"]

[tool.pytest.ini_options]
pythonpath = ["."]
testpaths = ["tests"]