Tests

Merge pull request #134 from hyanwong/extras #294

	name: Tests

	on:
	pull_request:
	push:
	branches: [main]

	jobs:
	pre-commit:
	name: Lint
	runs-on: ubuntu-latest
	steps:
	- name: Cancel Previous Runs
	uses: styfle/cancel-workflow-action@0.11.0
	with:
	access_token: ${{ github.token }}
	- uses: actions/checkout@v3
	- uses: actions/setup-python@v4
	with:
	python-version: '3.10'
	- uses: pre-commit/action@v3.0.0

	test:
	name: Python
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ["3.10"]

	steps:
	- name: Cancel Previous Runs
	uses: styfle/cancel-workflow-action@0.6.0
	with:
	access_token: ${{ github.token }}
	- uses: actions/checkout@v3
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	python3 -m pip install --upgrade pip
	python3 -m pip install -r requirements.txt
	- name: Test with pytest
	run: \|
	python3 -m pytest --cov=GeneticInheritanceGraph --cov-report=xml --cov-branch -n 0 tests
	- name: Upload coverage reports to Codecov
	uses: codecov/codecov-action@v3
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
	- name: Delete coverage
	run: \|
	rm .coverage

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