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README.md

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![image](https://github.com/user-attachments/assets/fdfff5a3-b923-45d7-b5aa-4dfcd932c767)
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* After running the entire process successfully, you can find several output files in your `${SpliceDecoder_folder}/DS_input/result`
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* `*Main_output.txt`
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* `*Main_table.tsv`
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* `*NMD_check.txt`
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* `*Domain_integrity_indi.txt`
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* `Effect_score.tsv`
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<br>
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## Visualize your DS simulation
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* Based on your Main_output file, you can pcik ceratin DS event to visualize it using this code
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* Based on your Main_table file, you can pcik ceratin DS event to visualize it using this code
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conda activate splice-decoder
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python code/02-3_v3_Draw_consequence.py --input ${working directory} --splicing_event RI --gene ENSMUSG00000027470.9 --sim_splicing_event RI --transcript ENSMUST00000028970.7

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