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Makefile
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230 lines (178 loc) · 5.31 KB
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#
#CC=cc
#CFLAGS=-O
#LDFLAGS=-s
#LDLIBS=-lm
#LD=$(CC)
## NetBSD-1.0 (tested on Amiga)
##
#CC=gcc
#CFLAGS=-O2
#LDFLAGS=-s
#LDLIBS=-lm
#LD=$(CC)
# DEC Alpha/OSF
#
#CC=cc
#CFLAGS=-O2
#LDFLAGS=-s
#LDLIBS=-lm
#LD=$(CC)
## Amiga/AmigaDOS
## Tested on an Amiga 2000 w/ 68030+68882 with gcc and dmake, OS 3.1
#CC=gcc
#CFLAGS=-O2 -m68020 -m68881
#LDFLAGS=-s
#LDLIBS=-lm
#LD=$(CC)
## HPUX
##
#CC=c89
#CFLAGS=-O
#LDFLAGS=-s
#LDLIBS=-lm
#LD=$(CC)
## Linux
##
CC=gcc
CFLAGS=-O3 -Wall
LDFLAGS=
LDLIBS=-lm
LD=$(CC)
## SGI
##
#CC=cc
#CFLAGS=-O2 -mips1
#LDFLAGS=-s
#LDLIBS=-lm
#LD=$(CC)
TESTFILES_SOM=ex.dat ex_fts.dat ex_ndy.dat ex_fdy.dat
TESTFILES_LVQ=ex1.dat ex2.dat
OBJS_COMMON=lvq_pak.o fileio.o labels.o datafile.o version.o
OBJS_SOM=som_rout.o $(OBJS_COMMON)
OBJS_LVQ=lvq_rout.o $(OBJS_COMMON)
UMATOBJS=umat.o map.o median.o header.o
OTHERFILES=header.ps
PROGRAMS_SOM=vcal mapinit vsom qerror randinit lininit visual sammon planes vfind umat
PROGRAMS_LVQ=accuracy knntest pick setlabel lvqtrain lvq1 lvq2 lvq3 olvq1 eveninit \
propinit showlabs mindist mcnemar sammon cmatr elimin balance \
stddev classify extract lvq_run
all: som lvq
lvq: $(PROGRAMS_LVQ)
som: $(PROGRAMS_SOM)
# SOM programs
vsom: vsom.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ vsom.o $(OBJS_SOM) $(LDLIBS)
vsomtest: vsomtest.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ vsomtest.o $(OBJS_SOM) $(LDLIBS)
qerror: qerror.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ qerror.o $(OBJS_SOM) $(LDLIBS)
mapinit: mapinit.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ mapinit.o $(OBJS_SOM) $(LDLIBS)
randinit: mapinit
rm -f $@
ln mapinit $@
lininit: mapinit
rm -f $@
ln mapinit $@
vcal: vcal.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ vcal.o $(OBJS_SOM) $(LDLIBS)
visual: visual.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ visual.o $(OBJS_SOM) $(LDLIBS)
sammon: sammon.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ sammon.o $(OBJS_SOM) $(LDLIBS)
planes: planes.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ planes.o $(OBJS_SOM) $(LDLIBS)
vfind: vfind.o $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ vfind.o $(OBJS_SOM) $(LDLIBS)
# Umat
umat: $(UMATOBJS) $(OBJS_SOM)
$(LD) $(LDFLAGS) -o $@ $(UMATOBJS) $(OBJS_SOM) $(LDLIBS)
map.o umat.o: umat.h fileio.h datafile.o lvq_pak.h labels.h
median.o: umat.h
# LVQ programs
accuracy: accuracy.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ accuracy.o $(OBJS_LVQ) $(LDLIBS)
knntest: knntest.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
pick: pick.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
setlabel: setlabel.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
classify: classify.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
showlabs: showlabs.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
extract: extract.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
mindist: mindist.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
stddev: stddev.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
balance: balance.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
mcnemar: mcnemar.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
#sammon: sammon.o $(OBJS_LVQ)
# $(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
cmatr: cmatr.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
elimin: elimin.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
lvqtrain: lvqtrain.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
lvq1: lvqtrain
rm -f $@
ln lvqtrain $@
olvq1: lvqtrain
rm -f $@
ln lvqtrain $@
lvq2: lvqtrain
rm -f $@
ln lvqtrain $@
lvq3: lvqtrain
rm -f $@
ln lvqtrain $@
eveninit: eveninit.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
propinit: eveninit
rm -f $@
ln eveninit $@
lvq_run: lvq_run.o $(OBJS_LVQ)
$(LD) $(LDFLAGS) -o $@ $@.o $(OBJS_LVQ) $(LDLIBS)
version.o: version.h
# for testing
#TRAND=-rand 1
#ALPHA_TYPE=-alpha_type inverse_t
#BUFFER=-buffer 500
somexample: $(PROGRAMS_SOM)
./randinit -din ex.dat -cout ex.cod -xdim 12 -ydim 8 -topol hexa \
-neigh bubble -rand 123
./vsom -din ex.dat -cin ex.cod -cout ex.cod -rlen 1000 \
-alpha 0.05 -radius 10 $(TRAND) $(ALPHA_TYPE) $(BUFFER)
./vsom -din ex.dat -cin ex.cod -cout ex.cod -rlen 10000 \
-alpha 0.02 -radius 3 $(TRAND) $(ALPHA_TYPE) $(BUFFER)
./qerror -din ex.dat -cin ex.cod
./vcal -din ex_fts.dat -cin ex.cod -cout ex.cod
./visual -din ex_ndy.dat -cin ex.cod -dout ex.nvs
./visual -din ex_fdy.dat -cin ex.cod -dout ex.fvs
lvqexample: $(PROGRAMS_LVQ)
./eveninit -din ex1.dat -cout ex1e.cod -noc 200
./mindist -cin ex1e.cod
./balance -din ex1.dat -cin ex1e.cod -cout ex1b.cod
./olvq1 -din ex1.dat -cin ex1b.cod -cout ex1o.cod -rlen 5000
./accuracy -din ex2.dat -cin ex1o.cod
fileio.o: fileio.h
datafile.o: lvq_pak.h datafile.h fileio.h
labels.o: labels.h lvq_pak.h
lvq_pak.o: lvq_pak.h datafile.h fileio.h labels.h
lvq_rout.o: lvq_rout.h lvq_pak.h datafile.h fileio.h
som_rout.o: som_rout.h lvq_pak.h datafile.h fileio.h labels.h
accuracy.o knntest.o pick.o setlabel.o lvqtrain.o eveninit.o \
propinit.o showlabs.o mindist.o mcnemar.o sammon.o cmatr.o \
elimin.o balance.o stddev.o classify.o \
lvq_run.o: lvq_pak.h fileio.h datafile.h labels.h lvq_rout.h
vcal.o mapinit.o vsom.o qerror.o visual.o sammon.o:\
lvq_pak.h datafile.h fileio.h labels.h som_rout.h
clean:
rm -f *.o $(PROGRAMS_SOM) $(PROGRAMS_LVQ)