xarray-ome/.github/workflows/tests.yml at caa2a3fa8b8c5d755a60850e32a55497914e38fe · ianhi/xarray-ome · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
name: Tests

on:
  push:
    branches: [main, implement-ngff-zarr-integration, metadata-conversion-refactor]
  pull_request:
    branches: [main]

jobs:
  test:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        python-version: ['3.11', '3.12', '3.13']

    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 0  # Needed for hatch-vcs to determine version

    - name: Install uv
      uses: astral-sh/setup-uv@v5
      with:
        version: "latest"

    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v5
      with:
        python-version: ${{ matrix.python-version }}

    - name: Install dependencies
      run: uv sync --all-groups

    - name: Run tests with pytest
      run: uv run pytest -v --cov=xarray_ome --cov-report=xml --cov-report=term

    - name: Upload coverage to Codecov
      if: matrix.python-version == '3.11'
      uses: codecov/codecov-action@v5
      with:
        file: ./coverage.xml
        fail_ci_if_error: false