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Hi,
I am running infercnv on control normal cells versus tumour cells.
I was just wondering how genes that have all 0 in a cancer cells but counts in normal cells are handled? I cannot quite find how this behaviour is handled? Would this 'falsely' show as loss and if so, would this be incorrect/ a bug?
Many thanks!
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Hi,
I am running infercnv on control normal cells versus tumour cells.
I was just wondering how genes that have all 0 in a cancer cells but counts in normal cells are handled? I cannot quite find how this behaviour is handled? Would this 'falsely' show as loss and if so, would this be incorrect/ a bug?
Many thanks!
Version information
No response