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Add module for BioQC #15

@grst

Description

@grst

BioQC performs signature enrichment for tissue signatures. This allows to check if e.g. samples have been swapped, or contaminations happend during sample handling.

Repo:
https://github.com/Accio/BioQC

Example code, you can use something similar in the pipeline (currently in private gitlab):
https://gitlab.i-med.ac.at/icbi-lab/ibdome/ibdome-projects/-/blob/2b1e4b4499d731293feebc8266510004b5f423a4/subprojects/data-overview-for-grant-application/13_plots_for_zlatko.Rmd#L70-120

Input:

  • gene expression matrix
  • sample sheet

Output:

  • heatmap
  • table

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