This repository maintains the Nextflow workflow code for Sanger WXS somatic variant calling. The underlying containerized variant calling tools include CaVEMan and Pindle, which are originated from https://github.com/cancerit/dockstore-cgpwxs.
This repository maintains the Nextflow workflow code for Sanger WXS somatic variant calling. The underlying containerized variant calling tools include CaVEMan and Pindle, which are originated from https://github.com/cancerit/dockstore-cgpwxs.