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fix the song-upload inputs bug
1 parent 3dfec70 commit 3805c67

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Lines changed: 4 additions & 4 deletions

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sanger-wxs-variant-calling/main.nf

Lines changed: 4 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -381,10 +381,10 @@ workflow SangerWxs {
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// upload variant results in paralllel
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if (!local_mode) {
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upSnv(study_id, pGenVarSnv.out.payload, pGenVarSnv.out.files_to_upload)
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upIndel(study_id, pGenVarIndel.out.payload, pGenVarIndel.out.files_to_upload)
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upSupp(study_id, pGenVarSupp.out.payload, pGenVarSupp.out.files_to_upload)
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upQc(study_id, pGenQc.out.payload, pGenQc.out.files_to_upload)
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upSnv(study_id, pGenVarSnv.out.payload, pGenVarSnv.out.files_to_upload, '')
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upIndel(study_id, pGenVarIndel.out.payload, pGenVarIndel.out.files_to_upload, '')
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upSupp(study_id, pGenVarSupp.out.payload, pGenVarSupp.out.files_to_upload, '')
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upQc(study_id, pGenQc.out.payload, pGenQc.out.files_to_upload, '')
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}
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if (params.cleanup) {

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