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Merge pull request #10 from icgc-argo/sanger-wxs-variant-calling@3.1.6-3.2.0
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‎.gitignore‎

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wfpr_modules/github.com/*/*/*/tests

‎README.md‎

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# ICGC-ARGO Sanger WXS Variant Calling Pipeline
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# ICGC ARGO Sanger WXS Variant Calling Workflow
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This repository maintains the Nextflow pipeline code for Sanger WXS somatic variant calling. The underlying containerized variant calling tools include CaVEMan and Pindle, which are originated from https://github.com/cancerit/dockstore-cgpwxs.
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This repository maintains the Nextflow workflow code for Sanger WXS somatic variant calling. The underlying containerized variant calling tools include CaVEMan and Pindle, which are originated from https://github.com/cancerit/dockstore-cgpwxs.

‎main.nf‎

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sanger-wxs-variant-calling/main.nf

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‎nextflow.config‎

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sanger-wxs-variant-calling/nextflow.config

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