Get error in compile test of MOOSE installation

[sSajjad90]

I got this error in MOOSE installation. Would you please let me know how can I fix it?

Sincerely,
Sajjad

`(moose) sajjad@sajjad-PC:~$ conda install moose-tools
Collecting package metadata (current_repodata.json): failed

UnavailableInvalidChannel: The channel is not accessible or is invalid.
channel name: moose
channel url: https://mooseframework.org/conda/moose
error code: 404

You will need to adjust your conda configuration to proceed.
Use conda config --show channels to view your configuration's current state,
and use conda config --show-sources to view config file locations.
`

[loganharbour]

That is an old channel. Please run the following to remove it and recreate your environment:

conda deactivate
conda env remove -n moose
conda config --remove channels https://mooseframework.org/conda/moose
conda config --add channels https://conda.software.inl.gov/public
conda create --name moose -q -y
conda activate moose
conda install moose-tools
conda install moose-libmesh

Sorry for the trouble. I'll make an issue so that in the future we have this information on the site.

[sSajjad90]

Many thanks,

Now I got stuck with a new problem
at the last step to 'make -j4' there is the following passage and 'run test' failed.

Any advice?

Linking Executable /home/sajjad/projects/moose/framework/contrib/exodiff/exodiff... /home/sajjad/miniconda3/envs/moose/bin/../lib/gcc/x86_64-conda-linux-gnu/9.3.0/../../../../x86_64-conda-linux-gnu/bin/ld: /home/sajjad/miniconda3/envs/moose/lib/libcrypto.so.1.1: undefined reference to clock_gettime@GLIBC_2.17'
/home/sajjad/miniconda3/envs/moose/bin/../lib/gcc/x86_64-conda-linux-gnu/9.3.0/../../../../x86_64-conda-linux-gnu/bin/ld: /home/sajjad/miniconda3/envs/moose/lib/libcrypto.so.1.1: undefined reference to __fdelt_chk@GLIBC_2.15' /home/sajjad/miniconda3/envs/moose/bin/../lib/gcc/x86_64-conda-linux-gnu/9.3.0/../../../../x86_64-conda-linux-gnu/bin/ld: /home/sajjad/miniconda3/envs/moose/lib/libssl.so.1.1: undefined reference to memcpy@GLIBC_2.14'
/home/sajjad/miniconda3/envs/moose/bin/../lib/gcc/x86_64-conda-linux-gnu/9.3.0/../../../../x86_64-conda-linux-gnu/bin/ld: /home/sajjad/miniconda3/envs/moose/lib/libcrypto.so.1.1: undefined reference to getauxval@GLIBC_2.16' /home/sajjad/miniconda3/envs/moose/bin/../lib/gcc/x86_64-conda-linux-gnu/9.3.0/../../../../x86_64-conda-linux-gnu/bin/ld: /home/sajjad/miniconda3/envs/moose/lib/libcrypto.so.1.1: undefined reference to secure_getenv@GLIBC_2.17'
collect2: error: ld returned 1 exit status
/home/sajjad/projects/moose/framework/moose.mk:370: recipe for target '/home/sajjad/projects/moose/framework/contrib/exodiff/exodiff' failed
make: *** [/home/sajjad/projects/moose/framework/contrib/exodiff/exodiff] Error 1
make: *** Waiting for unfinished jobs....
(moose) sajjad@sajjad-PC:~/projects/moose/test$
`

[milljm]

What Arch/Version of Linux are you both running on? If you are unsure, and even if you are not can you try the following command and report back the results

lsb_release -a

I am also interested in your Conda environments. Can you post the results of the following command as well:

conda info --all

[loganharbour]

Please try the following in /projects/moose:

git clean -xfd
conda create -n moosenew moose-tools moose-libmesh
conda activate moosenew
cd test
make -j 4

[sSajjad90]

What Arch/Version of Linux are you both running on? If you are unsure, and even if you are not can you try the following command and report back the results

lsb_release -a

I am also interested in your Conda environments. Can you post the results of the following command as well:

conda info --all

(base) sajjad@sajjad-PC:~/projects/moose$ lsb_release -a
No LSB modules are available.
Distributor ID:	LinuxMint
Description:	Linux Mint 19.3 Tricia
Release:	19.3
Codename:	tricia

(base) sajjad@sajjad-PC:~/projects/moose$ conda info --all

     active environment : base
    active env location : /home/sajjad/miniconda3
            shell level : 1
       user config file : /home/sajjad/.condarc
 populated config files : /home/sajjad/.condarc
          conda version : 4.10.3
    conda-build version : not installed
         python version : 3.9.5.final.0
       virtual packages : __cuda=11.2=0
                          __linux=5.4.0=0
                          __glibc=2.27=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /home/sajjad/miniconda3  (writable)
      conda av data dir : /home/sajjad/miniconda3/etc/conda
  conda av metadata url : None
           channel URLs : https://conda.software.inl.gov/public/linux-64
                          https://conda.software.inl.gov/public/noarch
                          https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://conda.anaconda.org/idaholab/linux-64
                          https://conda.anaconda.org/idaholab/noarch
                          https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/sajjad/miniconda3/pkgs
                          /home/sajjad/.conda/pkgs
       envs directories : /home/sajjad/miniconda3/envs
                          /home/sajjad/.conda/envs
               platform : linux-64
             user-agent : conda/4.10.3 requests/2.25.1 CPython/3.9.5 Linux/5.4.0-87-generic linuxmint/19.3 glibc/2.27
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False

# conda environments:
#
base                  *  /home/sajjad/miniconda3
moose                    /home/sajjad/miniconda3/envs/moose

sys.version: 3.9.5 (default, Jun  4 2021, 12:28:51) 
...
sys.prefix: /home/sajjad/miniconda3
sys.executable: /home/sajjad/miniconda3/bin/python
conda location: /home/sajjad/miniconda3/lib/python3.9/site-packages/conda
conda-build: None
conda-env: /home/sajjad/miniconda3/bin/conda-env
user site dirs: 

CIO_TEST: <not set>
CONDA_DEFAULT_ENV: base
CONDA_EXE: /home/sajjad/miniconda3/bin/conda
CONDA_PREFIX: /home/sajjad/miniconda3
CONDA_PROMPT_MODIFIER: (base) 
CONDA_PYTHON_EXE: /home/sajjad/miniconda3/bin/python
CONDA_ROOT: /home/sajjad/miniconda3
CONDA_SHLVL: 1
CURL_CA_BUNDLE: <not set>
DEFAULTS_PATH: /usr/share/gconf/cinnamon.default.path
MANDATORY_PATH: /usr/share/gconf/cinnamon.mandatory.path
PATH: /home/sajjad/miniconda3/bin:/home/sajjad/projects/moose/python/peacock:/home/sajjad/miniconda3/bin:/home/sajjad/miniconda3/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
REQUESTS_CA_BUNDLE: <not set>
SSL_CERT_FILE: <not set>
XDG_SEAT_PATH: /org/freedesktop/DisplayManager/Seat0
XDG_SESSION_PATH: /org/freedesktop/DisplayManager/Session0

[sSajjad90]

Please try the following in /projects/moose:

git clean -xfd
conda create -n moosenew moose-tools moose-libmesh
conda activate moosenew
cd test
make -j 4

It works properly 👍 👍

Many thanks

[sSajjad90]

Hi,

I just wanted to let you know that I have exactly the same problem and I'm interested in knowing how to solve it.

Try the last commands I replied above as the solution.