slide-deid: Pathology whole slide imaging (WSI) de-identification

Build App

• Follow these steps to build the app

$ git clone https://github.com/idso-fa1-pathology/slide-deid
$ cd slide-deid
$ pip install -r requirements.txt
$ python -m PyInstaller --onefile --noconsole SlideDeID.py --icon=assets/deid_icon.ico

• Generated app (SlideDeID) will be saved under dist subfolder

Notes

• Supported scanners: Leica AT2, Leica GT450, and Motic.
• De‑identification: Performed directly on the raw slide—be sure a backup copy is retained.

Disclaimer

This code repo is intended exclusively for research purposes and is not intended for clinical use.